Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060211.seq
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro...   101   9e-22
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ...   101   9e-22
AY071174-1|AAL48796.1|  195|Drosophila melanogaster RE22911p pro...    29   3.5  
AE014297-892|AAF54348.1|  195|Drosophila melanogaster CG9740-PA ...    29   3.5  
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P...    29   6.1  

>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
           protein.
          Length = 1000

 Score =  101 bits (241), Expect = 9e-22
 Identities = 40/88 (45%), Positives = 67/88 (76%)
 Frame = +2

Query: 251 DMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 430
           + L +Q+ L +  +++  LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++  P 
Sbjct: 84  NQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQ 143

Query: 431 XKEAGIRMFTSVPGVFGNRQTENLDV*K 514
            +E+ +R+F+SVP +FGN++ + +D+ K
Sbjct: 144 LQESALRIFSSVPSIFGNQEAQYIDLIK 171



 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = +3

Query: 12  DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVLI 191
           DQA F QLL +LLSTDND+R QAE+AYNN+  E KV HL  +IQN   +E+ RQ AAVL+
Sbjct: 4   DQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLL 63

Query: 192 RRLFS 206
           RRLF+
Sbjct: 64  RRLFT 68


>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
           protein.
          Length = 1105

 Score =  101 bits (241), Expect = 9e-22
 Identities = 40/88 (45%), Positives = 67/88 (76%)
 Frame = +2

Query: 251 DMLREQLXLTLXMDLSQXLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 430
           + L +Q+ L +  +++  LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++  P 
Sbjct: 84  NQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQ 143

Query: 431 XKEAGIRMFTSVPGVFGNRQTENLDV*K 514
            +E+ +R+F+SVP +FGN++ + +D+ K
Sbjct: 144 LQESALRIFSSVPSIFGNQEAQYIDLIK 171



 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = +3

Query: 12  DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLXNSIQNADIAEDVRQTAAVLI 191
           DQA F QLL +LLSTDND+R QAE+AYNN+  E KV HL  +IQN   +E+ RQ AAVL+
Sbjct: 4   DQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLL 63

Query: 192 RRLFS 206
           RRLF+
Sbjct: 64  RRLFT 68


>AY071174-1|AAL48796.1|  195|Drosophila melanogaster RE22911p
           protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 113 KSSAPXEFNSKCRHCRRCASN 175
           K   P ++ + C HCR+C SN
Sbjct: 32  KDGEPKKYRALCTHCRKCQSN 52


>AE014297-892|AAF54348.1|  195|Drosophila melanogaster CG9740-PA
           protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 113 KSSAPXEFNSKCRHCRRCASN 175
           K   P ++ + C HCR+C SN
Sbjct: 32  KDGEPKKYRALCTHCRKCQSN 52


>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
           isoform A protein.
          Length = 1357

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 86  RIQQHSNRNKSSAPXEFNSKCRHCRRCASNGGRADTKII*CRI 214
           +++QH+N N  ++        RHC RC +  GR   +   CR+
Sbjct: 10  QLEQHNNHNAHTSDPS-----RHCARCTTELGRITNRGAPCRV 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,000,102
Number of Sequences: 53049
Number of extensions: 488663
Number of successful extensions: 1197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)