SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060207.seq
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006          102   2e-22
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538          102   2e-22
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062...   102   2e-22
05_01_0043 - 295041-295173,296252-296537,296616-296697                102   3e-22
01_07_0267 + 42410174-42410252,42410679-42411097                       96   2e-20
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252...    49   4e-06
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382...    32   0.45 
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980...    30   1.4  
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235...    30   1.8  
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319           29   2.4  
12_01_0135 + 1042889-1044255,1045368-1045809                           29   3.1  
10_08_0401 + 17629912-17630376                                         29   3.1  
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959...    29   3.1  
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881...    29   3.1  
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511...    29   3.1  
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    28   5.5  
04_04_0819 - 28312667-28313219,28315157-28316430                       28   5.5  
08_02_0707 - 20212190-20214592                                         28   7.2  
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493...    28   7.2  
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788...    28   7.2  
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755     28   7.2  
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396...    27   9.6  
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783...    27   9.6  
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726...    27   9.6  

>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
          Length = 165

 Score =  102 bits (245), Expect = 2e-22
 Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFS 432
           VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   A  Y L+ G+ HL +GLA G +
Sbjct: 46  VMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLA 105

Query: 433 GLAAGFAIGIVGDAGV 480
           GLAAG AIGIVGDAGV
Sbjct: 106 GLAAGMAIGIVGDAGV 121



 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +2

Query: 155 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
           PFFG +GAASA++FS +GAAYGTAKSG G+A+M
Sbjct: 12  PFFGFLGAASALVFSCMGAAYGTAKSGVGVASM 44



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 495 QQPKVFVGMILILIF 539
           QQPK+FVGMILILIF
Sbjct: 126 QQPKLFVGMILILIF 140



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 9/30 (30%), Positives = 22/30 (73%)
 Frame = +1

Query: 262 RPELIMKSIIPVVMAGIIAIYGLVVAVLIA 351
           +P+L +  I+ ++ A  +A+YGL+V ++++
Sbjct: 127 QPKLFVGMILILIFAEALALYGLIVGIILS 156


>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
          Length = 165

 Score =  102 bits (245), Expect = 2e-22
 Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFS 432
           VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   A  Y L+ G+ HL +GLA G +
Sbjct: 46  VMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLA 105

Query: 433 GLAAGFAIGIVGDAGV 480
           GLAAG AIGIVGDAGV
Sbjct: 106 GLAAGMAIGIVGDAGV 121



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 155 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
           PFFG +GAASA+IFS +GAAYGTAKSG G+A+M
Sbjct: 12  PFFGFLGAASALIFSCMGAAYGTAKSGVGVASM 44



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 495 QQPKVFVGMILILIF 539
           QQPK+FVGMILILIF
Sbjct: 126 QQPKLFVGMILILIF 140



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 9/30 (30%), Positives = 22/30 (73%)
 Frame = +1

Query: 262 RPELIMKSIIPVVMAGIIAIYGLVVAVLIA 351
           +P+L +  I+ ++ A  +A+YGL+V ++++
Sbjct: 127 QPKLFVGMILILIFAEALALYGLIVGIILS 156


>02_04_0181 -
           20705307-20705439,20705991-20706037,20706181-20706229,
           20706685-20707055
          Length = 199

 Score =  102 bits (245), Expect = 2e-22
 Identities = 49/84 (58%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFS 432
           VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   A  Y L+ G+ HL +GLA G +
Sbjct: 48  VMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLA 107

Query: 433 GLAAGFAIGIVGDAGVPWYCFSSL 504
           GLAAG AIGIVGDAGV  +   S+
Sbjct: 108 GLAAGMAIGIVGDAGVRVWAAKSI 131



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 23/33 (69%), Positives = 30/33 (90%)
 Frame = +2

Query: 155 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
           PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 14  PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 46



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 495 QQPKVFVGMILILIF 539
           QQPK+FVGMILILIF
Sbjct: 160 QQPKLFVGMILILIF 174



 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 193 LQRLGSCLWNCQVRNWYC-RHVVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 351
           +QR    L+ C    + C R    +P+L +  I+ ++ A  +A+YGL+V ++++
Sbjct: 137 VQRHVYVLFKCLAEIFKCLRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 190


>05_01_0043 - 295041-295173,296252-296537,296616-296697
          Length = 166

 Score =  102 bits (244), Expect = 3e-22
 Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFS 432
           VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   A  Y L+ G+ HL +GLA G +
Sbjct: 47  VMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLA 106

Query: 433 GLAAGFAIGIVGDAGV 480
           GLAAG AIGIVGDAGV
Sbjct: 107 GLAAGMAIGIVGDAGV 122



 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +2

Query: 155 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
           PFFG +GAASA++FS +GAAYGTAKSG G+A+M
Sbjct: 13  PFFGFLGAASALVFSCMGAAYGTAKSGVGVASM 45



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 495 QQPKVFVGMILILIF 539
           QQPK+FVGMILILIF
Sbjct: 127 QQPKLFVGMILILIF 141



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 9/30 (30%), Positives = 22/30 (73%)
 Frame = +1

Query: 262 RPELIMKSIIPVVMAGIIAIYGLVVAVLIA 351
           +P+L +  I+ ++ A  +A+YGL+V ++++
Sbjct: 128 QPKLFVGMILILIFAEALALYGLIVGIILS 157


>01_07_0267 + 42410174-42410252,42410679-42411097
          Length = 165

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFS 432
           VMRPEL+MKSI+PVVMAG++ IYGL++AV+I   +   A  Y  + G +HL AGLA G  
Sbjct: 46  VMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLC 105

Query: 433 GLAAGFAIGIVGDAGV 480
            LAAG AIG+VGDAGV
Sbjct: 106 ALAAGLAIGVVGDAGV 121



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +2

Query: 137 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
           N   + PF G +GAA A++FS +GAAYGTA+SG G+A M
Sbjct: 6   NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHM 44



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 495 QQPKVFVGMILILIF 539
           QQPK+FVGMILILIF
Sbjct: 126 QQPKLFVGMILILIF 140


>01_05_0664 +
           24122958-24123070,24123184-24123261,24125040-24125210,
           24125288-24125456
          Length = 176

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
 Frame = +1

Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP----ANYP--LYKGFIHLGAGL 417
           +  P +  K++I V+    +AIYG++VA+++   L+       ++P  L  G+    +GL
Sbjct: 52  IKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPTALVHHPESLRAGYAIFASGL 111

Query: 418 AVGFSGLAAGFAIGIVGDA 474
            VGF+ L  G  +GI+G +
Sbjct: 112 IVGFANLVCGVCVGIIGSS 130


>07_03_1215 +
           24937016-24937229,24937418-24937623,24938135-24938207,
           24938619-24938812
          Length = 228

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 458 PMAKPAARPENPTAKPAPKWM 396
           P AKPAA+P+ P  KP P+ M
Sbjct: 91  PAAKPAAKPKKPPVKPLPEMM 111


>04_03_0301 +
           14094370-14094584,14096694-14096727,14098084-14098095,
           14098400-14098574,14099064-14099299,14099396-14100457
          Length = 577

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 420 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 292
           S+   ++ E   KG+VG      SNQ  HD T D  +T  D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231


>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
            32323670-32323753,32323834-32324104,32324294-32324547,
            32324709-32324918,32325839-32326024
          Length = 987

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 480  HACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRH 301
            + C  H+ YG+ G +      + ++ VD P+V G+V    +    + S + TV    T +
Sbjct: 896  NTCKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIVD-NSDSVQEEPSVEATVSATETSN 953

Query: 300  DD 295
             D
Sbjct: 954  VD 955


>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
          Length = 317

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 351 WCPPGASQLPPLQRVHPLG 407
           W PPG  +LPPL  +H  G
Sbjct: 44  WAPPGEPRLPPLLLIHGFG 62


>12_01_0135 + 1042889-1044255,1045368-1045809
          Length = 602

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 506 LRLLKQYHGTPASPTMPMAKPAARPENPTAKPAP 405
           LRL    +  PA P  P + PA  P + TA P P
Sbjct: 124 LRLRSLLNSDPAPPPPPPSHPALLPPDATAPPPP 157


>10_08_0401 + 17629912-17630376
          Length = 154

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 167 VMGAASAIIFSALGAAYGTAKSGTGIAA 250
           V GAA+   F+AL  AY  A+   G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138


>08_02_0341 +
           15994817-15994852,15995371-15995439,15995667-15995973,
           15996231-15996253
          Length = 144

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 357 GTSNQDSHDQTVDGNNTRHDDRNDRL 280
           G  + + HD ++DG N  +DD  D L
Sbjct: 98  GAEDDNGHDVSIDGLNANNDDNGDEL 123


>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
            8812361-8812492,8812681-8812864,8813002-8813135,
            8813552-8813656,8813738-8813839,8813930-8814022,
            8814136-8814456,8814595-8814696,8814791-8814853,
            8815213-8815708,8815964-8816124,8816213-8816743,
            8817077-8817118,8817203-8817334,8817639-8817703,
            8817858-8818169,8818262-8818334,8818425-8818517,
            8819440-8819501,8819740-8819809
          Length = 1777

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 485  HGTPASPTMPMAKPAARPENPTAKPAP 405
            +G PASP  P+A P     +P   P+P
Sbjct: 1649 NGNPASPNGPLASPGGTEASPHGLPSP 1675


>01_01_0668 -
           5109476-5110112,5110196-5110439,5110519-5110917,
           5111390-5111668,5111886-5112257,5112371-5112475,
           5112832-5112909,5112990-5113199,5113287-5113406,
           5113508-5113606,5113685-5113750,5113914-5114141,
           5114216-5114521,5115324-5115381
          Length = 1066

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 560 KTPNTSAKNKNKNHSXEYLRLLKQYHGTPASPTMPMAKPAARPENPTAKP 411
           + P  S   + K+H+   +     + G   SPTMP   P   P+ P+A P
Sbjct: 368 RAPRQSGAKRQKHHAPPPM-----FRGPHISPTMPPIPPQPGPKAPSAHP 412


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 545 SAKNKNKNHSXEYLRLLKQYHGTPASPTMPMAKPAARPENPT 420
           SA   N   + EYL     Y G P    +P+  P+ +P NPT
Sbjct: 183 SAAFNNPERAVEYL-----YSGVPEQMDIPVPPPSIQPANPT 219


>04_04_0819 - 28312667-28313219,28315157-28316430
          Length = 608

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 25/79 (31%), Positives = 40/79 (50%)
 Frame = +1

Query: 238 WYCRHVVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGL 417
           W+ R +++    +M  ++P   A  +++ G  V VL+   L  PA + L K F     G 
Sbjct: 337 WWLRWLLVMVVGLMAMLVPN-FADFLSLVGSSVCVLLGFVL--PAAFHL-KVF-----GA 387

Query: 418 AVGFSGLAAGFAIGIVGDA 474
            VG+ GLA   A+ +VG A
Sbjct: 388 EVGWPGLAGDVAVIVVGTA 406


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 354 TSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHH 253
           +SN++SH  ++  N+ + +  +   HD    HHH
Sbjct: 558 SSNEESHHNSLTENSCKENHSHCHGHDHHHHHHH 591


>05_05_0070 +
           22148595-22148907,22148988-22149104,22149196-22149350,
           22149987-22150061,22150179-22150469,22150942-22151292,
           22151390-22151794
          Length = 568

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 270 ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 362
           AD   D  CR G       SG    + +CPP
Sbjct: 24  ADSSADEECRRGSSSSSASSGDASSESYCPP 54


>03_06_0209 -
           32377045-32378008,32378086-32378210,32378772-32378816,
           32379009-32379295,32379778-32381509,32381631-32381971,
           32383753-32383876,32384484-32384722,32385156-32385534
          Length = 1411

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 349 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAG 477
           +GA  EP   P+ +       G A+ F G  AG A+G+VG++G
Sbjct: 9   SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESG 47


>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
          Length = 482

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -2

Query: 453 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 349
           G  G       S+T   VD+P    VVGW   GTS
Sbjct: 4   GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38


>07_03_1767 + 29338867-29338912,29339261-29339325,29339571-29339642,
            29339913-29339956,29340047-29340158,29340879-29340950,
            29341449-29341511,29341957-29342034,29342110-29342202,
            29342294-29342413,29342762-29342845,29343094-29343309,
            29343401-29343448,29343761-29343871,29344170-29344267,
            29345004-29345248,29345764-29345832,29345919-29345983,
            29346168-29346337,29346434-29346512,29346614-29346869,
            29347416-29347461,29347602-29347710,29347820-29347882,
            29350075-29350107,29350924-29351442
          Length = 991

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 487  TTARLHLPRCLWRNRQPD 434
            T  RL   RCLW++R+PD
Sbjct: 966  TVTRLPPTRCLWQSRRPD 983


>05_04_0355 -
           20577189-20577275,20578001-20578129,20578252-20578371,
           20578505-20578741,20578983-20579258,20579375-20579508,
           20580006-20581632
          Length = 869

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 439 AAGFAIG-IVGDAGVPWYC 492
           AAG AIG    D G PW+C
Sbjct: 144 AAGLAIGSFASDLGAPWFC 162


>04_01_0567 -
           7263744-7263922,7264020-7264259,7264919-7264982,
           7265088-7265393,7265652-7265866,7266195-7266489,
           7266596-7266655,7267091-7267717,7268510-7268596,
           7269292-7269612,7270051-7270224,7272806-7275022
          Length = 1594

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 33  FVCAK-VVSWSECVQIVITVFGTC 101
           F+CA  VV WS  + + + VFGTC
Sbjct: 553 FMCANTVVLWSGPLAMTVLVFGTC 576


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,427,425
Number of Sequences: 37544
Number of extensions: 443316
Number of successful extensions: 1749
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -