Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060207.seq
(643 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 139 2e-35
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 2.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 4.4
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 5.8
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 5.8
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 5.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.7
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 139 bits (337), Expect = 2e-35
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +1
Query: 256 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSG 435
VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAG L+EP Y L+KGF+HLGAGLAVGFSG
Sbjct: 45 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGGLEEPKGYTLFKGFVHLGAGLAVGFSG 104
Query: 436 LAAGFAIGIVGDAGV 480
LAAGFAIGIVGDAGV
Sbjct: 105 LAAGFAIGIVGDAGV 119
Score = 79.0 bits (186), Expect = 4e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +2
Query: 134 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 253
E++PIY PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM
Sbjct: 4 EDHPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 43
Score = 31.1 bits (67), Expect = 0.009
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 495 QQPKVFVGMILILIF 539
QQP++FVGMILILIF
Sbjct: 124 QQPRLFVGMILILIF 138
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/47 (25%), Positives = 17/47 (36%)
Frame = -3
Query: 554 PNTSAKNKNKNHSXEYLRLLKQYHGTPASPTMPMAKPAARPENPTAK 414
P KN+N NH + L GT + A P+ + K
Sbjct: 111 PKNQYKNQNNNHYTSHQHLRTHLRGTLTVNVSVLLLSLASPDESSLK 157
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 132 LKIIQSTDPSLELWGRRLLSSS 197
+ I + TDP E W RR L S
Sbjct: 142 MTITELTDPVKEFWERRALQIS 163
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 509 YLRLLKQYHGTPASPTMPMAKPAARPENPTAKPAPKWMNPL 387
+ R L + AS TM M K PEN W N L
Sbjct: 39 FWRTLDYAYPDEASKTMAMMKGEYIPENALPVGIEIWRNKL 79
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 187 YHLQRLGSCLWNCQVRNWYCRHVVM-RPELIMKS 285
YH R + CQ N +C H+ + P + KS
Sbjct: 24 YHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKS 57
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 187 YHLQRLGSCLWNCQVRNWYCRHVVM-RPELIMKS 285
YH R + CQ N +C H+ + P + KS
Sbjct: 24 YHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKS 57
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 298 VMAGIIAIYGLVVAVLIAGALQEPANY 378
+++G+I GL++ VLI G++ E +
Sbjct: 413 IVSGLIT--GLIMRVLICGSISEEQKF 437
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 5.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 271 LIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPL 384
L++ SII + G I + VAV + L+ P NY L
Sbjct: 46 LVLGSIIVGTVIGNILV---CVAVFLVRKLRRPCNYLL 80
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 51 VSWSECVQIVITVFGTCKYSH 113
+SW E +QI + V +Y H
Sbjct: 694 LSWLERIQIALDVLEGIRYLH 714
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 51 VSWSECVQIVITVFGTCKYSH 113
+SW E +QI + V +Y H
Sbjct: 732 LSWLERIQIALDVLEGIRYLH 752
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,556
Number of Sequences: 438
Number of extensions: 4164
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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