Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060205.seq
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    27   0.52 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.6  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   1.6  
AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    25   2.1  
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    23   6.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.4  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+R  VQI   A + +PDH PD
Sbjct: 396 TKHVIPKRTLVQIPAYAIQRDPDHYPD 422


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
 Frame = +2

Query: 296 YLHPHTVLITKSGVIQLIMKS---KLPYAIELQEWLLE---EVIPQVLCTGKYAPAVEMD 457
           YL    +L+T S V+ + + +   + P    +  W+     E++P+VLC  +     E  
Sbjct: 305 YLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVHRVFIELLPKVLCIERPKKEDEPS 364

Query: 458 TNDVIAKIDDLTQKLTVPTQI 520
            ND     D LT    VP  +
Sbjct: 365 DNDDQTPTDVLTDVFQVPPDV 385


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -1

Query: 614 RFRNPCRAVSASRRATI-ISLANKMSDRLASAKSALAPSIFASDRQFWQ*HHLYPFQRPA 438
           + R   RAV    R +I I L    SDR+   + A        +   W  H +YP + P 
Sbjct: 176 QIREEGRAVLQPNRMSIDIPLNYTASDRVTEQRLAYFREDIGVNLHHWHWHLVYPAEGPE 235

Query: 437 R 435
           R
Sbjct: 236 R 236


>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+   VQI + A + +PDH PD
Sbjct: 19  TRHIVPKDTVVQIPIYAIQRDPDHYPD 45


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 614 RFRNPCRAVSASRRATIISLANKMSDRLA 528
           R   PCRAV  + +A  + L  K+ + LA
Sbjct: 10  RLSPPCRAVELTAKALGLELERKLVNLLA 38


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 183 CERAIRVHVDGKYKSTFEHADQIQT 257
           CER +     G YK   EH   + T
Sbjct: 180 CERTLNASGGGSYKLKNEHGQTVST 204


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 465 SFVSISTAGAYLPVHST*GMTSSKSHSCNSMA*GNL 358
           S   + TA A +PV S   ++++ S SC+S A G+L
Sbjct: 223 SLSPVHTAPA-IPVSSCSPLSTASSASCSSSAAGSL 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,047
Number of Sequences: 2352
Number of extensions: 15784
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)