Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060202.seq
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17; ... 111 2e-23
UniRef50_P41656 Cluster: Uncharacterized 19.8 kDa protein in P14... 81 3e-14
UniRef50_A1YJ62 Cluster: DNA helicase; n=8; Nucleopolyhedrovirus... 53 5e-06
UniRef50_Q80LM4 Cluster: Helicase; n=1; Adoxophyes honmai NPV|Re... 50 4e-05
UniRef50_A0EYX7 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep... 48 3e-04
UniRef50_Q9YMN0 Cluster: Helicase; n=1; Lymantria dispar MNPV|Re... 44 0.004
UniRef50_Q8V5R6 Cluster: ORF88; n=14; Nucleopolyhedrovirus|Rep: ... 40 0.040
UniRef50_Q77LZ8 Cluster: Helicase; n=5; Nucleopolyhedrovirus|Rep... 40 0.040
UniRef50_Q8IAQ2 Cluster: Putative uncharacterized protein MAL8P1... 38 0.28
UniRef50_Q0IL18 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep... 36 0.86
UniRef50_A2DTE6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q0IL17 Cluster: ORF102; n=3; Nucleopolyhedrovirus|Rep: ... 35 2.0
UniRef50_P15442 Cluster: Serine/threonine-protein kinase GCN2; n... 33 4.6
UniRef50_UPI00006CE532 Cluster: Bromodomain containing protein; ... 33 8.0
>UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17;
Nucleopolyhedrovirus|Rep: ATP-dependent DNA helicase
P143 - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 1223
Score = 111 bits (266), Expect = 2e-23
Identities = 56/113 (49%), Positives = 77/113 (68%)
Frame = +2
Query: 254 LIIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTL 433
LII +T TGTRRL E+V+NF++FLNTIR++ G CA+H + +D EEA A + +
Sbjct: 29 LIIIDTDTGTRRLLEHVSNFRRFLNTIRSDAAGACARHQRAARHDDEEEA--PPAARVSF 86
Query: 434 DGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKIFSRAPTLDTLTNVCKRA 592
GH VLE+NDFC+FVKPF+LK+HY KN L L F ++ + TN+C +A
Sbjct: 87 AGHSLVLENNDFCVFVKPFLLKRHYDEIKNYLKLDRFFKSDNPEH-TNMCVQA 138
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +1
Query: 466 FLHFCKTFHFEEAL*VIQKYINFENFFKSTDPGYINKCVQAGDYYYWPNWPKGQAFSFNG 645
F F K F + I+ Y+ + FFKS +P + N CVQAGDY YWPNWP QA SF G
Sbjct: 98 FCVFVKPFLLKRHYDEIKNYLKLDRFFKSDNPEHTNMCVQAGDYCYWPNWPASQAVSFTG 157
Query: 646 W 648
W
Sbjct: 158 W 158
>UniRef50_P41656 Cluster: Uncharacterized 19.8 kDa protein in
P143-LEF5 intergenic region; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 19.8 kDa
protein in P143-LEF5 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 173
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = -3
Query: 114 KNHHPFLHRIKTLIKDFNNTLLFGAYIQIYDLSTPAR 4
KNHHPFLHRI+TLI+DFNNTLLFGAY+QIYDLSTPAR
Sbjct: 23 KNHHPFLHRIETLIQDFNNTLLFGAYVQIYDLSTPAR 59
>UniRef50_A1YJ62 Cluster: DNA helicase; n=8;
Nucleopolyhedrovirus|Rep: DNA helicase - Spodoptera
frugiperda nuclear polyhedrosis virus (SfNPV)
Length = 1228
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1
Query: 466 FLHFCKTFHFEEAL*VIQKYINFENFFKSTDPGYINKCVQAGDYYYWPNWPKGQAFSFNG 645
F F + F E ++ I F+ F S PGY NKCV++GDYYYWPN A + G
Sbjct: 96 FRMFVRPFIDAENYSRVKDQICFKKFISSNFPGYANKCVKSGDYYYWPN----MAVIYCG 151
Query: 646 W 648
W
Sbjct: 152 W 152
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 440 HDWVLESNDFCIFVKPFILKKHYKSYKNILILKIF 544
HDW N F +FV+PFI ++Y K+ + K F
Sbjct: 87 HDWCARQNIFRMFVRPFIDAENYSRVKDQICFKKF 121
>UniRef50_Q80LM4 Cluster: Helicase; n=1; Adoxophyes honmai NPV|Rep:
Helicase - Adoxophyes honmai nucleopolyhedrovirus
Length = 1213
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 352 SVRKTRHGLVLRRHRR--SYRKTGSSTNIRRPRLGVGK*RFLHFCKTFHFEEAL*VIQKY 525
S +T++GL+ RR R + + +I + V F+ K ++ ++ K
Sbjct: 62 SNHQTQNGLLQRRDSRMATLKDATDDISIEQHEWTVQGNYFIITVKPHIHKKYYSLVSKD 121
Query: 526 INFENFFKSTDPGYINKCVQAGDYYYWPN 612
INF F +STD Y N CV++ +YYYWPN
Sbjct: 122 INFSKFVESTDKDYSNYCVKSRNYYYWPN 150
>UniRef50_A0EYX7 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep:
Helicase - Ecotropis obliqua NPV
Length = 1251
Score = 47.6 bits (108), Expect = 3e-04
Identities = 35/124 (28%), Positives = 60/124 (48%)
Frame = +2
Query: 221 VRD*QLARCKSLIIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEE 400
++D L C LI++N +++ + V NFQ+ L T+RN C K S C + +
Sbjct: 27 LKDFNLVDC--LILKNDVLQKKQIVKNVANFQRLLQTMRNETT-KCLK----SYCHNVHD 79
Query: 401 ATEKQAVQQTLDGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKIFSRAPTLDTLTNV 580
+ HDW ++ N F + V+PFI K+Y++ K+ + F ++ D N
Sbjct: 80 --------HVIAPHDWYVQGNCFIVMVRPFIENKYYETVKHNINFNQFLQSNKQD-YGNE 130
Query: 581 CKRA 592
C +A
Sbjct: 131 CVKA 134
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 514 IQKYINFENFFKSTDPGYINKCVQAGDYYYWPNWPKGQAFSFNGW 648
++ INF F +S Y N+CV+A DYYYWPN S+ GW
Sbjct: 110 VKHNINFNQFLQSNKQDYGNECVKANDYYYWPN----ITISYFGW 150
>UniRef50_Q9YMN0 Cluster: Helicase; n=1; Lymantria dispar MNPV|Rep:
Helicase - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 1218
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 251 SLIIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQT 430
S+I+RN +R+ NFQ+ L + + AK S+ A + +
Sbjct: 35 SIILRNDVNQNKRVVRTYENFQKLLYALTD---ARTAK----SAAWGGAPAACFEGHDRC 87
Query: 431 LDGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKIFSRA 553
++ HDW ++ N F + V+PFI ++HY+ KN + F R+
Sbjct: 88 VEPHDWCVQDNCFVLMVRPFIERRHYERIKNEVDFTQFLRS 128
Score = 39.5 bits (88), Expect = 0.069
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 475 FCKTFHFEEAL*VIQKYINFENFFKSTDPGYINKCVQAGDYYYWPN 612
F + H+E I+ ++F F +S G N+C AGDY YWPN
Sbjct: 107 FIERRHYER----IKNEVDFTQFLRSNRRGLGNECAFAGDYVYWPN 148
>UniRef50_Q8V5R6 Cluster: ORF88; n=14; Nucleopolyhedrovirus|Rep:
ORF88 - Helicoverpa zea SNPV
Length = 173
Score = 40.3 bits (90), Expect = 0.040
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -3
Query: 105 HPFLHRIKTLIKDFNNTLLFGAYIQIYDLST 13
+P+ + +K LI+D TL FGAYI ++DLST
Sbjct: 29 NPYRNNVKKLIEDHKRTLQFGAYIDVFDLST 59
>UniRef50_Q77LZ8 Cluster: Helicase; n=5; Nucleopolyhedrovirus|Rep:
Helicase - Helicoverpa armigera NPV
Length = 1253
Score = 40.3 bits (90), Expect = 0.040
Identities = 13/40 (32%), Positives = 28/40 (70%)
Frame = +2
Query: 425 QTLDGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKIF 544
+++D HDW ++ N F I ++PFIL+++Y++ ++ + F
Sbjct: 112 KSIDSHDWCVQGNYFAIKIRPFILQRYYEAVRDSISFSEF 151
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 514 IQKYINFENFFKSTDPGYINKCVQAGDYYYWPN 612
++ I+F F S Y NK AGDY YWPN
Sbjct: 142 VRDSISFSEFVMSNAEEYANKTESAGDYVYWPN 174
>UniRef50_Q8IAQ2 Cluster: Putative uncharacterized protein
MAL8P1.135; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.135 - Plasmodium
falciparum (isolate 3D7)
Length = 965
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 272 RTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCED--TEEATEKQAVQQTLDGHD 445
RT + E +NN + +N ++NN N PC ++ + CE+ E+ +K + +
Sbjct: 268 RTTKEKNHEMINNNK--INNLKNNNNHPCNNYNSYNQCEERKNEDINDKPTNKYNKEISL 325
Query: 446 WVLESNDFCIFVKPFILKKHYKSYKNILILK--IFSR 550
+ L N + I FILKK S LIL+ IFS+
Sbjct: 326 FTLFKNLYIIKNWIFILKKGLTSIFIFLILRLIIFSK 362
>UniRef50_Q0IL18 Cluster: Helicase; n=2; Nucleopolyhedrovirus|Rep:
Helicase - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 1251
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 434 DGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKIFSRAPTLDTLTNVCKRA 592
D H+W + N F + ++PF+ KHY K+ + F +D N CK+A
Sbjct: 134 DAHNWFVHGNYFAMKIRPFVRLKHYDIVKDAFDFEDF----VVDGNANDCKQA 182
Score = 35.9 bits (79), Expect = 0.86
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 511 VIQKYINFENFFKSTDPGYINKCVQAGDYYYWPNWPKGQAFSFNGW 648
+++ +FE+F G N C QAG+Y YWPN A S+ GW
Sbjct: 160 IVKDAFDFEDFVVD---GNANDCKQAGEYVYWPN----VAVSYFGW 198
>UniRef50_A2DTE6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 399
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 469 LHF-CKTFHFEEAL*VIQKYINFENFFKSTDPGYINKCVQA 588
LH+ CK FE + ++ Y+NF++F TD YIN +++
Sbjct: 92 LHYACKGGSFEVVVYILNNYMNFKDFIVKTDANYINFALES 132
>UniRef50_Q0IL17 Cluster: ORF102; n=3; Nucleopolyhedrovirus|Rep:
ORF102 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 169
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 105 HPFLHRIKTLIKDFNNTLLFGAYIQIYDLS 16
+P+ +++ L+ D TL FGA++ +YDLS
Sbjct: 25 NPYRYQLDKLVNDHQETLHFGAFVDVYDLS 54
>UniRef50_P15442 Cluster: Serine/threonine-protein kinase GCN2; n=4;
Saccharomycetaceae|Rep: Serine/threonine-protein kinase
GCN2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1659
Score = 33.5 bits (73), Expect = 4.6
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 215 QNVRD*QLARCKSLI--IRNTRTGTRRLFEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCE 388
QNV D QL KS I NT G +FE + Q+ L+ +N N + D +
Sbjct: 87 QNVMDSQLQMLKSEFKKIHNTSRGQEIIFEITSFTQEKLDEFQNVVNTQSLEDDRLQRIK 146
Query: 389 DTEEATEKQ 415
+T+E EK+
Sbjct: 147 ETKEQLEKE 155
>UniRef50_UPI00006CE532 Cluster: Bromodomain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: Bromodomain containing
protein - Tetrahymena thermophila SB210
Length = 2113
Score = 32.7 bits (71), Expect = 8.0
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 213 DKTYEINNLQDANH*SLETREQEHADCLSTL--TIFNSS*TQLETTLTVRAQNTTWA-RL 383
D Y NN NH SL H L T N+ T+ T +QN T R
Sbjct: 1131 DDLYLDNNTNSNNHHSLRQNNSSHLQQSHNLAETRANAHQTRSSTATYQDSQNNTKTLRA 1190
Query: 384 AKTPKKLQKNRQFN 425
+ KK +KNRQ+N
Sbjct: 1191 SSRNKKSKKNRQYN 1204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,597,265
Number of Sequences: 1657284
Number of extensions: 12175465
Number of successful extensions: 30531
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30511
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -