Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060202.seq
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 431 LDGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKI 541
           +  H+ + E + +C+FV        Y+SY + +   I
Sbjct: 103 VQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANI 139


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 431 LDGHDWVLESNDFCIFVKPFILKKHYKSYKNILILKI 541
           +  H+ + E + +C+FV        Y+SY + +   I
Sbjct: 103 VQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANI 139


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 568 INKCVQAGDYYYWPNWPKGQAF 633
           +  CV+  + Y W N P G  F
Sbjct: 512 LQTCVRCPNNYPWVNDPTGDGF 533


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 235 LLISYVLSSGTSFK 194
           L++  VLSSGT+FK
Sbjct: 83  LMVVAVLSSGTTFK 96


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 235 LLISYVLSSGTSFK 194
           L++  VLSSGT+FK
Sbjct: 83  LMVVAVLSSGTTFK 96


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 509 YSASSK*KVLQKCKNRYFPTPSRGRLMFVE 420
           Y   SK  V   C  + FP+PS     FVE
Sbjct: 242 YQRHSKQNVALLCPAQGFPSPSFRWYKFVE 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,403
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)