Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060202.seq
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021726-1|CAA16809.1| 1002|Drosophila melanogaster EG:171E4.1,F...    30   3.2  
X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (d...    28   9.7  
AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p pro...    28   9.7  
AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA ...    28   9.7  

>AL021726-1|CAA16809.1| 1002|Drosophila melanogaster
            EG:171E4.1,FBgn0000482;dor protein.
          Length = 1002

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +2

Query: 293  FEYVNNFQQFLNTIRNNFNGPCAK--HDMGSSCEDTEEATEKQAVQQTLDGHDWVLESND 466
            FE ++NF++ +     ++N    +   +M  + E T+ AT   A  Q L  H   +ES D
Sbjct: 827  FEKIDNFKEAICDALRDYNQRIQELQREMAETTEQTDRAT---AELQQLRQHSLTVESQD 883

Query: 467  FC------IFVKPFIL 496
             C      + VKPF +
Sbjct: 884  TCEICEMMLLVKPFFI 899


>X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (dor)
            protein.
          Length = 1002

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +2

Query: 293  FEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDGHDWVLESNDFC 472
            FE ++NF++ +     ++N    +       E TE+     A  Q L  H   +ES D C
Sbjct: 827  FEKIDNFKEAICDALRDYNQRIQELQR-EMAETTEQTDRVTAELQQLRQHSLTVESQDTC 885

Query: 473  ------IFVKPFIL 496
                  + VKPF +
Sbjct: 886  EICEMMLLVKPFFI 899


>AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p protein.
          Length = 1002

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +2

Query: 293  FEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDGHDWVLESNDFC 472
            FE ++NF++ +     ++N    +       E TE+     A  Q L  H   +ES D C
Sbjct: 827  FEKIDNFKEAICDALRDYNQRIQELQR-EMAETTEQTDRVTAELQQLRQHSLTVESQDTC 885

Query: 473  ------IFVKPFIL 496
                  + VKPF +
Sbjct: 886  EICEMMLLVKPFFI 899


>AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA
            protein.
          Length = 1002

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +2

Query: 293  FEYVNNFQQFLNTIRNNFNGPCAKHDMGSSCEDTEEATEKQAVQQTLDGHDWVLESNDFC 472
            FE ++NF++ +     ++N    +       E TE+     A  Q L  H   +ES D C
Sbjct: 827  FEKIDNFKEAICDALRDYNQRIQELQR-EMAETTEQTDRVTAELQQLRQHSLTVESQDTC 885

Query: 473  ------IFVKPFIL 496
                  + VKPF +
Sbjct: 886  EICEMMLLVKPFFI 899


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,016,986
Number of Sequences: 53049
Number of extensions: 555296
Number of successful extensions: 1411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)