Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060201.seq
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.54 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.54 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 207 PFSTIKLHNVHKKSNYNNNKTTI 139
           P STI L+N    SN+N + +++
Sbjct: 40  PSSTIDLYNTSSVSNFNESSSSV 62


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 207 PFSTIKLHNVHKKSNYNNNKTTI 139
           P STI L+N    SN+N + +++
Sbjct: 40  PSSTIDLYNTSSVSNFNESSSSV 62


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 274 YETNKIFNDQQTPY 233
           +E N +FNDQ+T +
Sbjct: 451 FEFNTVFNDQRTVF 464


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 195 IKLHNVHKKSNYNNNKTTIR 136
           +KL NV    NY N +T  R
Sbjct: 114 VKLQNVSLIINYENQRTRSR 133


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -3

Query: 510 LSPARXNPVVGPSRRRHQQDL 448
           L+P    P+V P   + ++D+
Sbjct: 106 LTPPNSEPLVSPKSEKEEKDM 126


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -1

Query: 245 TNAISDVSSVERIHFRL*SYTTYIRNQTIITIKLQLEQCFSY 120
           T ++  +  +  +H++L ++T  I     IT    +   F Y
Sbjct: 251 TFSVQKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGY 292


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -1

Query: 245 TNAISDVSSVERIHFRL*SYTTYIRNQTIITIKLQLEQCFSY 120
           T ++  +  +  +H++L ++T  I     IT    +   F Y
Sbjct: 207 TFSVQKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGY 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,816
Number of Sequences: 336
Number of extensions: 2177
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)