Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060201.seq
(524 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 34 8e-04
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 34 8e-04
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 30 0.017
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 27 0.12
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 27 0.12
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 27 0.12
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 27 0.12
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 26 0.21
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 26 0.27
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 26 0.27
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 0.27
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.47
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.47
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.47
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.47
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.47
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 25 0.47
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 0.47
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.63
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.63
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.63
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.63
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 1.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 1.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 3.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.7
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 34.3 bits (75), Expect = 8e-04
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR K ++ RT+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN 106
Query: 156 NN 151
NN
Sbjct: 107 NN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 34.3 bits (75), Expect = 8e-04
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR K ++ RT+ + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYN 106
Query: 156 NN 151
NN
Sbjct: 107 NN 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 29.9 bits (64), Expect = 0.017
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NE S YR K ++ R + + I L Y +S +N + +NYN
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYN 339
Query: 156 N 154
N
Sbjct: 340 N 340
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR + ++ R + + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 156 NN 151
NN
Sbjct: 104 NN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR + ++ R + + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 156 NN 151
NN
Sbjct: 104 NN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR + ++ R + + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 156 NN 151
NN
Sbjct: 104 NN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR + ++ R + + I L Y +S +N + +NYN
Sbjct: 47 QKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSN---YNNYNNNNYN 103
Query: 156 NN 151
NN
Sbjct: 104 NN 105
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 26.2 bits (55), Expect = 0.21
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NE S YR K ++ RT+ +R I L Y + +N + K NYN
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNY-----NNNNYKYNYN 334
Query: 156 N 154
N
Sbjct: 335 N 335
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.27
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNY 160
+NER YR K ++ RT+ + I L Y +S +N + +NY
Sbjct: 51 KNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.8 bits (54), Expect = 0.27
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ +R + + TI +N + +NYNNN
Sbjct: 284 KNEREYRKYRERSKERSRDRTE----RERSREPKIISSLSNKTIHNNNNYNNNNYNNN 337
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ + I L S +HN + K NYNNN
Sbjct: 50 KNEREYRKYRETSKERSRDRTERERSREPKIISSL------SNNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ + I L S +HN + K NYNNN
Sbjct: 51 KNEREYRKYRETSKERSRDRTERERSREPKIISSL------SNNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ + I L S +HN + K NYNNN
Sbjct: 51 KNEREYRKYRETSKERSRDRTERERSREPKIISSL------SNNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ + I L S +HN + K NYNNN
Sbjct: 51 KNEREYRKYRETSKERSRDRTERERSREPKIISSL------SNNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ RT+ + I L S +HN + K NYNNN
Sbjct: 51 KNEREYRKYRETSKERSRDRTERERSREPKIISSL------SNNTIHNNNYKYNYNNN 102
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.47
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR K ++ RT+ R + I S++ +H +NYN
Sbjct: 47 QKSYKNERKYRKYRERSKERSRDRTE--RERSREPKII-------SSLSNKTIHNNNNYN 97
Query: 156 NN 151
NN
Sbjct: 98 NN 99
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 25.0 bits (52), Expect = 0.47
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NER YR K ++ RT+ R + I S++ +H +NYN
Sbjct: 47 QKSYKNERKYRKYRERSKERSRDRTE--RERSREPKII-------SSLSNKTIHNNNNYN 97
Query: 156 NN 151
NN
Sbjct: 98 NN 99
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.63
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNN 154
+NER YR K ++ RT+ + I L Y +S +N +NYNN
Sbjct: 51 KNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNYNYSNYNNYN----NNYNN 103
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.6 bits (51), Expect = 0.63
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = -3
Query: 336 RKHERNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYN 157
+K +NE S YR K ++ R + + I L Y +S +N + K Y
Sbjct: 47 QKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNKKLYY 106
Query: 156 NN 151
N
Sbjct: 107 KN 108
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.63
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 415 ACICVRSDAETEVLLVTSSRRXDNW 489
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.63
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 415 ACICVRSDAETEVLLVTSSRRXDNW 489
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILC-RTYPFSTIKLHNVHKKSNYNNN 151
+NE+ YR K ++ RT+ + I L +T + +N + K NYNNN
Sbjct: 51 KNEKEYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNKYNYNNN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 1.9
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 324 RNERSQN*YRH*LKRKTMKRTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNN 151
+NER YR K ++ R + + I L S +HN + K NYNNN
Sbjct: 50 KNEREYRKYRETSKERSRDRAERERSREPKIISSL------SNNTIHNNNYKYNYNNN 101
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 339 TRKHERNERSQN*YRH*LKR-KTMK-RTKFLMINKRHIRCILCRTYPFSTIKLHNVHKKS 166
+R ER ++S R K KT K R++ M +R + + TI HN + +
Sbjct: 262 SRSREREQKSYKNEREYRKYGKTSKERSRDRMERERSKEPKIISSLSNKTI--HNNNNYN 319
Query: 165 NYNNNK 148
NYNN K
Sbjct: 320 NYNNKK 325
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 231 RCILCRTYPFSTIKLHNVHKKSNYNN 154
R ++ R P+ST + + + S Y N
Sbjct: 360 RLLMMRRTPYSTPEYDDTYMDSGYTN 385
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,065
Number of Sequences: 438
Number of extensions: 3134
Number of successful extensions: 38
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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