Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060200.seq
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 50 2e-06
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 50 2e-06
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 47 1e-05
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 47 1e-05
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 47 1e-05
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 47 1e-05
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 36 0.031
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 36 0.031
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 35 0.054
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 32 0.38
At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA he... 30 1.2
At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing ... 28 4.7
At1g63850.1 68414.m07227 PRLI-interacting factor-related similar... 28 4.7
At1g48260.1 68414.m05390 CBL-interacting protein kinase 17 (CIPK... 27 8.2
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ IVG RTP G F G + AT+L ++A ALK A V PA V +V G V+S++
Sbjct: 13 VCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLSAN 69
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP +N++C SG ++++ +AQ
Sbjct: 75 ARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQ 109
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ IVG RTP G F G + AT+L ++A ALK A V PA V +V G V+S++
Sbjct: 8 VCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLSAN 64
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP +N++C SG ++++ +AQ
Sbjct: 70 ARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQ 104
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ +VG RTP G F G + +AT L +IA ALK A V PA V+ + G V++++
Sbjct: 15 VCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTAN 71
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP IN++C +G +S++ ++Q
Sbjct: 77 ARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQ 111
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ +VG RTP G F G + +AT L +IA ALK A V PA V+ + G V++++
Sbjct: 15 VCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTAN 71
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP IN++C +G +S++ ++Q
Sbjct: 77 ARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQ 111
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ +VG RTP G F G + +AT L +IA ALK A V PA V+ + G V++++
Sbjct: 15 VCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTAN 71
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP IN++C +G +S++ ++Q
Sbjct: 77 ARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQ 111
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 317 IFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 487
+ +VG RTP G F G + +AT L +IA ALK A V PA V+ + G V++++
Sbjct: 15 VCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTAN 71
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 508 ARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQ 612
AR AAL AGIP IN++C +G +S++ ++Q
Sbjct: 77 ARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQ 111
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 496 RNLHARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSA 609
R + R AA AG P PV +NR C SG Q++ + A
Sbjct: 111 RAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVA 148
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 496 RNLHARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSA 609
R + R AA AG P PV +NR C SG Q++ + A
Sbjct: 68 RAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVA 105
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 496 RNLHARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSA 609
R R AA AG P+ P+ +NR C SG Q++ + A
Sbjct: 104 RASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVA 141
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 317 IFIVGAKRTPF-GTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVI 478
+ IV A+RT G F++T EL +++ V+P++V +VVG V+
Sbjct: 44 VVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVL 98
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 496 RNLHARXAALKAGIPQEKPVLGINRLCGSGFQSIVNSA 609
R R AA AG P+ V +NR C SG Q++ + A
Sbjct: 112 RASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVA 149
>At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA
helicase -Mus musculus,PIR2:I84741
Length = 621
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -1
Query: 537 NTSFERRVTCV*IPSVCDEEMTWPTTMLST*AGDTPASFKAPTVAIVCSSVADVLRKTPP 358
N + C+ IP+V + + T +G T A + P V ++ A++ +KT P
Sbjct: 131 NIEVPTEIQCIGIPAVMERKSV--VLGSHTGSGKTLA-YLLPIVQLMREDEANLGKKTKP 187
Query: 357 KVPNGVLLAPTMKI 316
+ P V+L PT ++
Sbjct: 188 RRPRTVVLCPTREL 201
>At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing
protein low similarity to RRM-containing protein SEB-4
[Xenopus laevis] GI:8895698; contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 285
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 388 RTADDSHGWCLEGGRSVPGSGRQHGRGPSHLFITN*RNLHARXAALKAGIPQEKPV 555
+T + HG+ G SVPGS GP+ +T ++ A A +GIP PV
Sbjct: 207 QTIPNGHGYTAVQGYSVPGSHILQLGGPTVSTMTT-SSMPALQAPYPSGIPGPAPV 261
>At1g63850.1 68414.m07227 PRLI-interacting factor-related similar to
PRLI-interacting factor G (GI:11139264) [Arabidopsis
thaliana]; contains Prosite PS00037: Myb DNA-binding
domain repeat signature 1
Length = 548
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 417 APTVAIVCSSVADVLRKTPPKVPNGVLLAPT 325
+PT+ + +S AD + K P ++ NGVL +P+
Sbjct: 56 SPTLFEMMASEADTIGKVPVQIHNGVLPSPS 86
>At1g48260.1 68414.m05390 CBL-interacting protein kinase 17 (CIPK17)
identical to CBL-interacting protein kinase 17
[Arabidopsis thaliana] gi|14571553|gb|AAK64513
Length = 432
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +1
Query: 250 KLEKVTGREI*---IKGLTYCRNNGDFHR 327
KL + GR++ I G++YC N G FHR
Sbjct: 105 KLSETQGRKMFQQLIDGVSYCHNKGVFHR 133
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,229,949
Number of Sequences: 28952
Number of extensions: 234673
Number of successful extensions: 682
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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