Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060199.seq
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SY51 Cluster: Chromosome undetermined SCAF12189, whol... 38 0.15
UniRef50_A7T8L0 Cluster: Predicted protein; n=2; Nematostella ve... 35 1.9
UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;... 34 3.3
UniRef50_Q9VT40 Cluster: CG6754-PB; n=2; Drosophila melanogaster... 33 4.3
UniRef50_Q96ZC7 Cluster: Putative uncharacterized protein ST1905... 33 4.3
UniRef50_UPI0000E7FBE6 Cluster: PREDICTED: hypothetical protein;... 33 7.5
UniRef50_Q870T9 Cluster: Putative uncharacterized protein B11H7.... 33 7.5
UniRef50_Q14258 Cluster: Tripartite motif-containing protein 25;... 33 7.5
UniRef50_Q98F69 Cluster: Mlr3905 protein; n=1; Mesorhizobium lot... 32 10.0
UniRef50_Q7M947 Cluster: SENSORY BOX/GGDEF FAMILY PROTEIN; n=1; ... 32 10.0
UniRef50_Q0U0M6 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 10.0
>UniRef50_Q4SY51 Cluster: Chromosome undetermined SCAF12189, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF12189, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 551
Score = 38.3 bits (85), Expect = 0.15
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -3
Query: 286 LSLGIVIRKVPPEFRQEADYLSFSLFLCPFCVSFSLLWICLGLCVCVSLFSFCLFCVS 113
LS+G+V+ KV R+ L + LC V+F+++W GL VC +L+ F L V+
Sbjct: 375 LSIGVVLNKV--SCRKTLVLLGCVVLLCLVLVAFTIVWEFWGLVVCCTLYGFFLGTVA 430
>UniRef50_A7T8L0 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 244 RQEADYLSFSLFLCPFCVSFSLLWICLGLCVCVSLF-SFCL 125
R E+ +L F L LC C S SL + CL LC C SLF FCL
Sbjct: 8 RCESLFLYFCLALCR-CESLSL-YFCLALCRCESLFLYFCL 46
Score = 33.5 bits (73), Expect = 4.3
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 244 RQEADYLSFSLFLCPFCVSFSLLWICLGLCVCVSLF-SFCL 125
R E+ +L F L LC C S L+ CL LC C SLF FCL
Sbjct: 134 RCESLFLYFCLALCQ-CESL-FLYFCLALCRCESLFLYFCL 172
Score = 33.1 bits (72), Expect = 5.7
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 244 RQEADYLSFSLFLCPFCVSFSLLWICLGLCVCVSLF-SFCL 125
R E+ +L F L LC C S L+ CL LC C SLF FCL
Sbjct: 36 RCESLFLYFCLALCR-CESL-FLYFCLALCRCESLFLYFCL 74
Score = 32.3 bits (70), Expect = 10.0
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 244 RQEADYLSFSLFLCPFCVSFSLLWICLGLCVCVSL-FSFCL 125
R E+ +L F L LC C S SL + CL LC C SL FCL
Sbjct: 64 RCESLFLYFCLALCR-CESLSL-YFCLALCRCESLSLYFCL 102
>UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 445
Score = 33.9 bits (74), Expect = 3.3
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -3
Query: 226 LSFSLFLCPFCVSFSLLWICLGLCVCVSLFSFCLFCV 116
+S +++C C+ S++ C+ +C+C+S+ + C+
Sbjct: 246 ISMCIYIC-ICICISIICTCVCICICISMCIYICICI 281
>UniRef50_Q9VT40 Cluster: CG6754-PB; n=2; Drosophila
melanogaster|Rep: CG6754-PB - Drosophila melanogaster
(Fruit fly)
Length = 827
Score = 33.5 bits (73), Expect = 4.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 402 SKEVLESSRKRAAPPEPGLPSKLPRHNGAPHHKVVDQRWGTGTLASDVTTQPA 560
S E E++RK P P +PS + AP + R +LA+++T QPA
Sbjct: 489 SDEENENARKPKETPAPTIPSMAKKKTEAPVATRISPRLNGKSLATNITNQPA 541
>UniRef50_Q96ZC7 Cluster: Putative uncharacterized protein ST1905;
n=3; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST1905 - Sulfolobus tokodaii
Length = 160
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 229 YLSFSLFLCPFCVSFSLLWICLGLCVCVSLFSFCLF 122
+ SF F SFSL W+CL C +L F LF
Sbjct: 82 FTSFQHFAVVIANSFSLSWVCLSTCSLTTLVLFTLF 117
>UniRef50_UPI0000E7FBE6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 155
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +3
Query: 435 AAPPEPGLPSKLPRHNGAPHHKVVDQRWGTGTLASDVT 548
AAP P PS PR APHH V QR + SDV+
Sbjct: 98 AAPLPPARPSGAPRRT-APHHAAVKQRCAHPSHGSDVS 134
>UniRef50_Q870T9 Cluster: Putative uncharacterized protein
B11H7.100; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B11H7.100 - Neurospora crassa
Length = 623
Score = 32.7 bits (71), Expect = 7.5
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 414 LESSRKRAAPPEPGLPSKLPRHNGAPHHKVVDQRWGTGT-LASDVTTQPAIALRVSTFLG 590
LES PP PSK +G PH + RWG A D + V FL
Sbjct: 54 LESGSALPEPPADAFPSKQNSAHGVPHRR---GRWGASVPTAEDTPKSEHLLPTVDQFLK 110
Query: 591 QQLTDLTS 614
+Q+ TS
Sbjct: 111 EQVGKATS 118
>UniRef50_Q14258 Cluster: Tripartite motif-containing protein 25;
n=22; Eutheria|Rep: Tripartite motif-containing protein
25 - Homo sapiens (Human)
Length = 630
Score = 32.7 bits (71), Expect = 7.5
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 399 ISKEVLESSRKRAAPPEPGLPSKLPRHNGAPHHKVVDQRWGTGTLASDVTTQP-AIALR- 572
+ K E + + PP P LPSKLP GAP V ++ G A ++ P + +L+
Sbjct: 380 VKKVSKEEKKSKKPPPVPALPSKLPTF-GAPEQLVDLKQAGLEAAAKATSSHPNSTSLKA 438
Query: 573 --VSTFLGQQLTDL 608
+ TFL + +L
Sbjct: 439 KVLETFLAKSRPEL 452
>UniRef50_Q98F69 Cluster: Mlr3905 protein; n=1; Mesorhizobium
loti|Rep: Mlr3905 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 183
Score = 32.3 bits (70), Expect = 10.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 226 LSFSLFLCPFCVSFSLLWICLGLCVCVSLFS 134
L F L +C F V FS LWI +GL + FS
Sbjct: 64 LLFGLIMCGFWVGFSDLWIIIGLAGYATTFS 94
>UniRef50_Q7M947 Cluster: SENSORY BOX/GGDEF FAMILY PROTEIN; n=1;
Wolinella succinogenes|Rep: SENSORY BOX/GGDEF FAMILY
PROTEIN - Wolinella succinogenes
Length = 583
Score = 32.3 bits (70), Expect = 10.0
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = -3
Query: 331 FGILILSPCPG-----LVDSLSLGIVIRKVPPEFRQEADYL--SFSLFLCP 200
FGIL LS P L+DS+ + I K+P E Q + YL SF LF CP
Sbjct: 498 FGIL-LSAIPSKEAFTLLDSIRVRIESLKIPHEGNQSSSYLTISFGLFTCP 547
>UniRef50_Q0U0M6 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 170
Score = 32.3 bits (70), Expect = 10.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +3
Query: 441 PPEPGLP-SKLPRHN---GAPH-HKVVDQRWGTGTLASDVTTQPAIALRVSTFLGQQL 599
PP +P + LPRHN PH H+++ +R GT S P + + F+G L
Sbjct: 37 PPHNRIPPTHLPRHNPTPALPHPHQLLTRRLGTRRAKSRARESPRATVEIGRFVGYSL 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,085,543
Number of Sequences: 1657284
Number of extensions: 7956504
Number of successful extensions: 28773
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28610
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -