Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060199.seq
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 193 VSFSLLWICLGLCVCVSLFSFCLFCV 116
           V  + +WIC    V +  ++  LFCV
Sbjct: 151 VFLAYVWICEMGVVTLQAYTLHLFCV 176


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
 Frame = -3

Query: 202 PFCVSFSLLWICLGL----CVCVSLFSFCLFCVS 113
           P C S      CL L    C+C  +FS  LF +S
Sbjct: 29  PVCSSQKGQKTCLNLSINYCICGYIFSAILFSLS 62


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 193 VSFSLLWICLGLCVCVSLFSFCLFCV 116
           V  + +WIC    V +  ++  LFCV
Sbjct: 151 VFLAYVWICEMGVVTLQAYTLHLFCV 176


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +2

Query: 266 DNNTEGQAVHQSGARTQDQD 325
           D + + ++ H +GA+ +D+D
Sbjct: 890 DRDEDERSFHSNGAKEEDED 909


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 438 APPEPGLPSKLP 473
           +PP P  PS+LP
Sbjct: 70  SPPSPPAPSELP 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,329
Number of Sequences: 336
Number of extensions: 1779
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)