Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060199.seq
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.6  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    24   3.5  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    24   3.5  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    24   3.5  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   3.5  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    24   3.5  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    24   3.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   4.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.1  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -3

Query: 205 CPFCVSFSL--LWICLGLCVCVSLFSFCLFCVSGQPDLEAVSI 83
           CPFC+ F+L  L++  G        SF ++C      LE  S+
Sbjct: 7   CPFCLLFNLYFLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSV 49


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPAPKPSPNCP 96


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPAPKPSPNCP 96


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPAPKPSPNCP 96


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPAPKPSPNCP 96


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPAPKPSPNCP 96


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +1

Query: 424 PASEP-PRPSPGCP 462
           P +EP P+PSP CP
Sbjct: 83  PNTEPVPKPSPNCP 96


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 560 RGLCCDVTCQSARSPSLIDDL 498
           RG  C ++C   R   L DDL
Sbjct: 567 RGWVCGISCAQLRDADLSDDL 587


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 464 AGQPGLGRGGSLAGTFQHLLGNLDLQA 384
           +G  G G GG  AG+F   L NL  QA
Sbjct: 167 SGGGGGGGGGGGAGSFAAALRNLAKQA 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,720
Number of Sequences: 2352
Number of extensions: 7653
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)