Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060197.seq
(511 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 45 3e-05
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 43 2e-04
11_06_0584 - 25220371-25222917 30 1.2
06_01_0611 + 4420873-4422207 30 1.2
02_04_0633 - 24616563-24617279 29 1.6
09_01_0005 - 193214-193228,193659-193776,193876-194072,194534-19... 29 2.2
04_02_0016 + 8557023-8557176,8557277-8557908 29 2.9
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 3.8
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 28 3.8
05_01_0051 - 345125-345693,345833-346925 28 5.0
01_04_0051 + 15430980-15431591 28 5.0
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 27 6.6
11_06_0014 - 19267601-19267831,19268338-19268454,19268733-192688... 27 6.6
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196 27 6.6
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 27 6.6
08_01_0786 - 7606984-7607037,7607235-7607379,7608103-7608163,760... 27 6.6
07_01_0785 + 6095041-6095135,6095455-6095760,6098458-6098554,609... 27 6.6
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 27 6.6
06_01_1205 - 10406603-10406651,10407013-10407476 27 6.6
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 27 6.6
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 27 6.6
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 27 6.6
11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834 27 8.8
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 27 8.8
04_04_1292 - 32413046-32413807,32413901-32413936,32414037-324141... 27 8.8
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 27 8.8
01_05_0424 + 22035700-22036215 27 8.8
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 6 NAIAYYVA----NESLRGGDLATQARVWQWXSWSDSELLPASCAWVFPYLGIMQFNKQNV 173
NAIA YVA N SL G L + + QW +S +E+ W++P LG +
Sbjct: 92 NAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLE 151
Query: 174 ERAKSDLLAALKVLDGHLLTRTFLV 248
E A + L +L L+ HL + T+LV
Sbjct: 152 EFAITSLKRSLGALNTHLASNTYLV 176
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 194 TGRLKSTGRTSSHTHLPCY---RGITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFL 364
T +S G ++H Y +TLAD+++ L + F +L S S +V+R+F
Sbjct: 156 TSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFW 215
Query: 365 TVAHQPQVSAVVGSLTLCAAPPTYXPK 445
T+ +QP V+G + P K
Sbjct: 216 TMVNQPNFKKVIGDFKQAESVPPVQKK 242
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 27 ANESLRGGDLATQARVWQWXSWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 206
A+ L G L A + QW +S +E+ W++P LGI + + E A + L +L
Sbjct: 88 ADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSL 147
Query: 207 KVLDGHLLTRTFLV 248
L+ HL + T+LV
Sbjct: 148 GALNTHLASNTYLV 161
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +3
Query: 27 ANESLRGGDLATQARVWQWXSWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 206
++ L G L A + QW +S +E+ + W+FP LG + + E A + L +L
Sbjct: 649 SDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSL 708
Query: 207 KVLDGHLLTRTFLV 248
L+ HL + T+LV
Sbjct: 709 GALNTHLASNTYLV 722
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +2
Query: 224 SSHTHLPCYRGITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVG 403
+S+T+L + +TLAD+++ L F ++ S S +V+R+F T+ +QP V+G
Sbjct: 155 ASNTYLVGH-SVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLG 213
Query: 404 SLTLCAAPPTYXPK 445
+ + P K
Sbjct: 214 DVKQAESVPPVQKK 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +2
Query: 224 SSHTHLPCYRGITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVG 403
+S+T+L + +TLAD+++ L F ++ + S +V+R+F T+ +QP V+G
Sbjct: 716 ASNTYLVGH-SVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMG 774
Query: 404 SLTLCAAPPTYXPK 445
+ + P K
Sbjct: 775 DVKQADSVPQVQKK 788
>11_06_0584 - 25220371-25222917
Length = 848
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 253 SVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 92
++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 387 NIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 331 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 420
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>02_04_0633 - 24616563-24617279
Length = 238
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 7 MPSLTTLPMKVSAEEIWLPKPVSGSGXHGLTANYC 111
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>09_01_0005 -
193214-193228,193659-193776,193876-194072,194534-195493
Length = 429
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 220 DIFSHAPSLLPRNHTCRCHCLQYTAACFPARARPERPFVADKRSALVPDRRPPAASVGR 396
D S A S L NHTC+ + T F R+ P + K A V R PA + R
Sbjct: 211 DHLSSASSQLMTNHTCKINSTCKTTT-FKTRSGPNQGNTKVKEMARVNKERKPAPLLSR 268
>04_02_0016 + 8557023-8557176,8557277-8557908
Length = 261
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -2
Query: 444 LGSYVGGAAQSVSEPTTADTCGWWATVRNQR*TFISDERTLGSSTCWKACSSVLKTMTSA 265
L S VGG S GW A RN + S+ G S +K SS +T+T
Sbjct: 182 LVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFL 241
Query: 264 SVIP 253
V P
Sbjct: 242 DVAP 245
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 244 RKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLS 95
+K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 428 EEPHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGLARAGKHAA 291
++PHR A R+P A+G G A R+S + + R HAA
Sbjct: 32 QQPHRP-APLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAA 76
>05_01_0051 - 345125-345693,345833-346925
Length = 553
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 248 YRGITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 421
+ G+ L +V+ ++ +++ + V P + V RW + + A+VG+ T CA
Sbjct: 226 FDGMLLRNVVSWNIMINGYVKVKRPE---QALEVVRWMAEIGVRGTAVAMVGAATACA 280
>01_04_0051 + 15430980-15431591
Length = 203
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 298 CFPARARPERPFVADKRSALVPDRRPPAASVGRRRLAHA 414
C R P ++ A+ P RRP A+ GRRR HA
Sbjct: 15 CMRQRRDPLLASLSRSSLAIEPPRRPCHAADGRRRRTHA 53
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGR 105
>11_06_0014 -
19267601-19267831,19268338-19268454,19268733-19268890,
19269501-19269612,19269721-19269908,19270344-19270436,
19270521-19270708,19271635-19271720,19272662-19272811,
19273930-19274065,19274143-19274222,19275546-19275626,
19276114-19276245,19276490-19276610,19277457-19277518,
19277846-19277974,19278514-19278573,19278689-19278772,
19278852-19279532
Length = 962
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 317 DPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYXP 442
DPS R + +W L + PQ V SL L A PP + P
Sbjct: 28 DPSAR---LAANQWLLALQRSPQAWGVATSL-LAAPPPGHPP 65
>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
Length = 676
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGR 105
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGR 105
>08_01_0786 -
7606984-7607037,7607235-7607379,7608103-7608163,
7608273-7608465
Length = 150
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 280 LQYTAACFPARARPERPFVADKRSALVPDRRPP-AASVGRRRLAHALCG 423
++ TAA A AR PF + +A P R P +A+ GRR +A G
Sbjct: 1 MEATAAAAAAPARSALPFRSRVAAAARPGRAPALSAAPGRRLVARRAAG 49
>07_01_0785 +
6095041-6095135,6095455-6095760,6098458-6098554,
6098943-6098999,6099202-6099751,6099922-6100234,
6100245-6100335,6101002-6101469
Length = 658
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 422 PHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSG 318
P A A RRR AA + T AE +S++NGR+G
Sbjct: 541 PSAAAAGRRRKRSAAAA--TATAAEGMSSSNGRNG 573
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 76 PIRAGSRSTVPPSRPPPAAGGGRGR 100
>06_01_1205 - 10406603-10406651,10407013-10407476
Length = 170
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 118 PALGSSLTLVSCNSTNRMLN 177
PALG + T+V C+ST LN
Sbjct: 113 PALGKATTVVMCSSTKHALN 132
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 72 PIRAGSRSTVPPSRPPPAAGGGRGR 96
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 328 PFVADKRSALVPDRRPPAASVGRRR 402
P A RS + P R PPAA GR R
Sbjct: 60 PIRAGSRSTVPPSRPPPAAGGGRGR 84
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 178 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDXHCQTRAWV 59
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834
Length = 273
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 259 HTCRCHCLQYTAACFPARARPE 324
H CRCHC T AC R E
Sbjct: 175 HACRCHC--RTIACLSRHGREE 194
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 220 DIFSHAPSLLPRNHTCRCHCLQYTAACFP 306
++FS A LP+ T CH L Y A FP
Sbjct: 498 NLFSKATLQLPKLDTIWCHHLWYAAPKFP 526
>04_04_1292 -
32413046-32413807,32413901-32413936,32414037-32414179,
32414263-32414419,32414518-32414679,32414860-32415107,
32415589-32415733
Length = 550
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 295 QQCTEDNDIGKCDSSVTRKVRVRRCPSSTFKAASRSDFARSTFC 164
+Q ED+D+ KC +S+ R ++++ SS + D R T C
Sbjct: 206 EQADEDSDLEKCKTSMRRVGKMQKDVSSA--CSKGDDPRRETLC 247
>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 109 CLLPALGSSLTLVSCNSTNRMLNVQSLTYW 198
C LP +GS L + S ML++Q YW
Sbjct: 1228 CTLPCVGSVLRVFSNRFFKEMLHLQKGIYW 1257
>01_05_0424 + 22035700-22036215
Length = 171
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 ARPERPFVAD-KRSALVPDRRPPAASVGRRRLAHA 414
A+P RPFVAD A+ D PPAA L A
Sbjct: 2 AQPWRPFVADISPVAVADDDDPPAACAACAHLGRA 36
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,969,199
Number of Sequences: 37544
Number of extensions: 328759
Number of successful extensions: 1109
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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