Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060196.seq
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein pr... 59 2e-08
BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing... 59 2e-08
AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing... 59 2e-08
AL512666-1|CAH73999.1| 129|Homo sapiens tudor domain containing... 59 2e-08
AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing... 59 2e-08
AL354764-1|CAH72280.1| 129|Homo sapiens tudor domain containing... 59 2e-08
AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens ... 59 2e-08
BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing... 58 3e-08
BC053549-1|AAH53549.1| 596|Homo sapiens RMI1 protein protein. 44 4e-04
BC039999-1|AAH39999.1| 379|Homo sapiens RMI1 protein protein. 44 4e-04
BC032494-1|AAH32494.1| 443|Homo sapiens RMI1 protein protein. 44 4e-04
BC020606-1|AAH20606.1| 424|Homo sapiens Unknown (protein for IM... 44 4e-04
AL732446-2|CAI13576.1| 625|Homo sapiens RMI1, RecQ mediated gen... 44 4e-04
AL732446-1|CAI13575.1| 415|Homo sapiens RMI1, RecQ mediated gen... 44 4e-04
AK022950-1|BAB14325.1| 625|Homo sapiens protein ( Homo sapiens ... 44 4e-04
BC064937-1|AAH64937.1| 470|Homo sapiens RMI1 protein protein. 44 6e-04
M57230-1|AAA59155.1| 918|Homo sapiens membrane glycoprotein 130... 30 8.3
EF064722-1|ABK41905.1| 918|Homo sapiens interleukin 6 signal tr... 30 8.3
BC117404-1|AAI17405.1| 918|Homo sapiens interleukin 6 signal tr... 30 8.3
BC117402-1|AAI17403.1| 918|Homo sapiens interleukin 6 signal tr... 30 8.3
AB102802-1|BAD89393.1| 857|Homo sapiens IL6ST nirs variant 4 pr... 30 8.3
AB015706-1|BAA78112.1| 329|Homo sapiens gp130 of the rheumatoid... 30 8.3
>BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>AL512666-1|CAH73999.1| 129|Homo sapiens tudor domain containing 3
protein.
Length = 129
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>AL354764-1|CAH72280.1| 129|Homo sapiens tudor domain containing 3
protein.
Length = 129
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21007 fis, clone CAE03871. ).
Length = 651
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQR 629
+ ++ L + GP P++PFGQ+
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQK 97
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing 3
protein.
Length = 650
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +3
Query: 336 MLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAE 515
ML+L + DG ++CT +E S++ +S+NTPPGTK+ L +++ +G + L S +VL
Sbjct: 1 MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSG-IVDIKNGFLLLNDSNTTVLGG 59
Query: 516 QYLI*LKNGN*TEVLPNTQEEA*ELKEGPSPWIPFGQ 626
+ ++ L + GP P++PFGQ
Sbjct: 60 EVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQ 96
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 IGGTVSHMIEKWELNRSLAKHTRGGIGAEGG 598
+GG V H+IEKWEL RSL+KH R IG EGG
Sbjct: 57 LGGEVEHLIEKWELQRSLSKHNRSNIGTEGG 87
>BC053549-1|AAH53549.1| 596|Homo sapiens RMI1 protein protein.
Length = 596
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>BC039999-1|AAH39999.1| 379|Homo sapiens RMI1 protein protein.
Length = 379
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>BC032494-1|AAH32494.1| 443|Homo sapiens RMI1 protein protein.
Length = 443
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>BC020606-1|AAH20606.1| 424|Homo sapiens Unknown (protein for
IMAGE:4774885) protein.
Length = 424
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>AL732446-2|CAI13576.1| 625|Homo sapiens RMI1, RecQ mediated genome
instability 1, homologr 3 protein.
Length = 625
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>AL732446-1|CAI13575.1| 415|Homo sapiens RMI1, RecQ mediated genome
instability 1, homolog protein.
Length = 415
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>AK022950-1|BAB14325.1| 625|Homo sapiens protein ( Homo sapiens
cDNA FLJ12888 fis, clone NT2RP2004081. ).
Length = 625
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>BC064937-1|AAH64937.1| 470|Homo sapiens RMI1 protein protein.
Length = 470
Score = 43.6 bits (98), Expect = 6e-04
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +3
Query: 249 IRSPVVVQIQKIRNVSAPK----ANEESTSAP------RMLKLTLHDGKVTCTGLEISHI 398
+ P QIQK+R + A + T P RML L L DG V G+E I
Sbjct: 95 VSQPAHSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQPI 154
Query: 399 PSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVL 509
P L + PPGTK+L+ + GV+ L P + VL
Sbjct: 155 PILHSDLPPGTKILIYG-NISFRLGVLLLKPENVKVL 190
>M57230-1|AAA59155.1| 918|Homo sapiens membrane glycoprotein 130
protein.
Length = 918
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
>EF064722-1|ABK41905.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
>BC117404-1|AAI17405.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
>BC117402-1|AAI17403.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
>AB102802-1|BAD89393.1| 857|Homo sapiens IL6ST nirs variant 4
protein.
Length = 857
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
>AB015706-1|BAA78112.1| 329|Homo sapiens gp130 of the rheumatoid
arthritis antigenic peptide-bearing soluble form (gp130
protein.
Length = 329
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 360 GKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISVLAEQYLI 527
GKVT + + + N PP ++ +EEL + W PS+ SV+ +Y I
Sbjct: 205 GKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,698,187
Number of Sequences: 237096
Number of extensions: 1837638
Number of successful extensions: 3967
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3927
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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