Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060195.seq
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    26   0.32 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    26   0.32 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   1.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 644 VILITKNYTYICICLYNYIVSTVTFTQ 564
           V++ T N  Y+C C Y  +V    F++
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAMFSR 340


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 644 VILITKNYTYICICLYNYIVSTVTFTQ 564
           V++ T N  Y+C C Y  +V    F++
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAMFSR 296


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 474 LYIXNYSLIDFNLTLDYFLRRKVLLKNTIYAVIYSNRC 361
           +++  Y + D N+ +D  L  + LLKN +  ++   RC
Sbjct: 15  VFLEEYVIPD-NIDIDDILSNERLLKNYVNCLLDKGRC 51


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 633 YKKLHIHMYMFI*LYSFYCDIYSGYLAITF 544
           Y K+ I   +F+   SFY  + SGY   TF
Sbjct: 233 YSKIIISGSIFMTTTSFYRILNSGYNLTTF 262


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 623 YTYICICLYNYIVSTVT 573
           YT   +CLY +++ T+T
Sbjct: 286 YTVTFLCLYLFLIITLT 302


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 32  VAYYLRACEYMFLNFS 79
           +  Y + CE+  LNFS
Sbjct: 457 IGLYFQLCEFSRLNFS 472


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,078
Number of Sequences: 336
Number of extensions: 2285
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)