Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060194.seq
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1Z7V9 Cluster: CG1814-PA, isoform A; n=6; Endopterygot... 85 1e-15
UniRef50_UPI0000F2E346 Cluster: PREDICTED: similar to 5-nucleoti... 57 4e-07
UniRef50_Q5BYV0 Cluster: SJCHGC08839 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_Q9H857 Cluster: 5'-nucleotidase domain-containing prote... 54 3e-06
UniRef50_Q552N5 Cluster: 5'-nucleotidase; n=2; Dictyostelium dis... 52 1e-05
UniRef50_UPI0000E49A4C Cluster: PREDICTED: hypothetical protein;... 50 4e-05
UniRef50_Q84MD4 Cluster: At2g23890; n=4; Magnoliophyta|Rep: At2g... 50 4e-05
UniRef50_UPI0000E47729 Cluster: PREDICTED: hypothetical protein,... 49 1e-04
UniRef50_A2Z1E0 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_A7S4J0 Cluster: Predicted protein; n=2; Nematostella ve... 46 8e-04
UniRef50_A5I9R3 Cluster: Cytosolic IMP-GMP specific 5'-nucleotid... 40 0.039
UniRef50_Q54XC1 Cluster: 5'-nucleotidase; n=1; Dictyostelium dis... 39 0.12
UniRef50_Q22L12 Cluster: Putative uncharacterized protein; n=27;... 38 0.16
UniRef50_Q9FI75 Cluster: Similarity to 5'-nucleotidase; n=8; Mag... 38 0.28
UniRef50_UPI0000E4A7FC Cluster: PREDICTED: similar to MGC108319 ... 35 2.0
UniRef50_A6FY99 Cluster: HAD superfamily (Subfamily IG) hydrolas... 35 2.0
UniRef50_Q00YJ5 Cluster: Cytosolic IMP-GMP specific 5-nucleotida... 35 2.0
UniRef50_Q86YG4 Cluster: 5'-nucleotidase domain-containing prote... 35 2.0
UniRef50_Q7RQE1 Cluster: Protein factor associated with neutral-... 34 3.4
UniRef50_UPI0000F32D71 Cluster: 5'-nucleotidase domain-containin... 33 4.5
UniRef50_Q2QWW4 Cluster: HAD superfamily hydrolase, 5'-Nucleotid... 33 4.5
UniRef50_Q1CWL9 Cluster: HAD superfamily (Subfamily IG) hydrolas... 33 6.0
UniRef50_Q8FA10 Cluster: Adenylate cyclase; n=4; Leptospira|Rep:... 33 7.9
UniRef50_Q22DQ0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_O67125 Cluster: DNA polymerase III subunit alpha; n=1; ... 33 7.9
>UniRef50_A1Z7V9 Cluster: CG1814-PA, isoform A; n=6;
Endopterygota|Rep: CG1814-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 548
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = +2
Query: 320 KKYSTRELLNEAYCRTKLKCRSKKLPQDVNPKGVFACNELDLSEVQVYGFDYDYTLAHYK 499
K S + L+EA TK K +SKKLP DV+P VFACNELDLSEVQVYGFDYDYTLA YK
Sbjct: 70 KTVSDFQKLHEA---TKKKFQSKKLPSDVHPDAVFACNELDLSEVQVYGFDYDYTLACYK 126
Query: 500 PTM 508
P +
Sbjct: 127 PIL 129
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +1
Query: 508 EHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
E LLYNL RE L++++ YP +IL+LEY+PNFAVRGLHYD+EKG K
Sbjct: 130 EDLLYNLAREMLVKRFRYPEDILQLEYEPNFAVRGLHYDVEKGLLVK 176
>UniRef50_UPI0000F2E346 Cluster: PREDICTED: similar to
5-nucleotidase domain containing 3; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to 5-nucleotidase
domain containing 3 - Monodelphis domestica
Length = 788
Score = 56.8 bits (131), Expect = 4e-07
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1
Query: 502 HNEHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
H L++N R+ L+ ++ YP EI EY PNFA+RGLHYD+ + K
Sbjct: 350 HLHTLIFNAARDLLINEHRYPAEIRNYEYDPNFAIRGLHYDVHRAILMK 398
Score = 50.8 bits (116), Expect = 3e-05
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHYKPTMNT 514
+NP +F+ NE+ LS++++YGFDYDYTL Y ++T
Sbjct: 317 LNPDAIFSNNEMSLSDIEIYGFDYDYTLVFYSKHLHT 353
>UniRef50_Q5BYV0 Cluster: SJCHGC08839 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08839 protein - Schistosoma
japonicum (Blood fluke)
Length = 245
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
VNP+ +F NE+ L ++QVYGFDYDYTLAHY
Sbjct: 75 VNPRDIFVNNEVKLGKIQVYGFDYDYTLAHY 105
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 508 EHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
+ ++N R +L+E+ YP EIL EY FA RGLH+D+++G K
Sbjct: 110 DKFIFNESRNWLVEQMKYPEEILNYEY-TEFAKRGLHFDVKRGLLMK 155
>UniRef50_Q9H857 Cluster: 5'-nucleotidase domain-containing protein
2; n=51; Euteleostomi|Rep: 5'-nucleotidase
domain-containing protein 2 - Homo sapiens (Human)
Length = 520
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 517 LYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
+++ R+ L+E Y YP I K +Y P+FA+RGLHYDI+K K
Sbjct: 89 IFSTARDILIEHYKYPEGIRKYDYNPSFAIRGLHYDIQKSLLMK 132
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHYKPTM-----NTCSIILVENIC*RSTITLQ 568
+NP ++A NE+ L +V+VYGFDYDYTLA Y + +T IL+E+ + ++
Sbjct: 51 LNPAAIYANNEISLRDVEVYGFDYDYTLAQYADALHPEIFSTARDILIEHY--KYPEGIR 108
Query: 569 KY*NWNTNPILLFEVYIMTLKRGLLLKL 652
KY + NP +++ LL+K+
Sbjct: 109 KY---DYNPSFAIRGLHYDIQKSLLMKI 133
>UniRef50_Q552N5 Cluster: 5'-nucleotidase; n=2; Dictyostelium
discoideum|Rep: 5'-nucleotidase - Dictyostelium
discoideum AX4
Length = 591
Score = 52.0 bits (119), Expect = 1e-05
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +1
Query: 508 EHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
+HL+Y+L +L+++ YP + +++Y P FA+RGLH+D+ G K
Sbjct: 178 QHLIYDLAMSHLVDEQKYPMALKEIKYDPTFAIRGLHFDVNHGLLMK 224
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
++P+ VF +EL L E+ V+GFDYDYTLA+Y
Sbjct: 143 LDPQDVFINSELKLEEIDVFGFDYDYTLANY 173
>UniRef50_UPI0000E49A4C Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 588
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 NEAYCRTK-LKCRSKKLPQDVNPKGVFACNELDLSEVQVYGFDYDYTLAHYKPTMN 511
+E CR L S V+P VFA NE+ L +++VYGFDYDYTLA Y ++
Sbjct: 49 SEILCRVNFLNPNSANHGYKVDPMTVFANNEVSLDDIEVYGFDYDYTLACYNDALH 104
Score = 37.5 bits (83), Expect = 0.28
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 559 YPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
+PP I + Y P++ +RGLH+D +KG K
Sbjct: 169 FPPGIQDMPYNPDYPIRGLHFDTKKGVLLK 198
>UniRef50_Q84MD4 Cluster: At2g23890; n=4; Magnoliophyta|Rep:
At2g23890 - Arabidopsis thaliana (Mouse-ear cress)
Length = 553
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
+NP+G++ L L +QVYGFDYDYTLAHY
Sbjct: 94 MNPQGIYVNKNLRLDNIQVYGFDYDYTLAHY 124
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +1
Query: 499 THNEHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
+H + L+Y+L +++++ ++ YP + EY P F +RGL+YD KG K
Sbjct: 126 SHLQSLIYDLAKKHMVNEFRYPDVCTQFEYDPTFPIRGLYYDKLKGCLMK 175
>UniRef50_UPI0000E47729 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 394
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHYKPTMN 511
V+P VFA NE+ L +++VYGFDYDYTLA Y ++
Sbjct: 7 VDPMTVFANNEVSLDDIEVYGFDYDYTLACYNDALH 42
>UniRef50_A2Z1E0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 514
Score = 48.4 bits (110), Expect = 1e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 404 VNPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
+NP+G++ + L ++QVYGFDYDYTL+HY
Sbjct: 76 MNPQGIYVNKNVKLDDLQVYGFDYDYTLSHY 106
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 502 HNEHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
H + L+Y+L +++L+ + YP LK EY F +RGL+YD KG K
Sbjct: 109 HLQCLIYDLAKKHLVNELKYPESCLKYEYDHGFPIRGLYYDRLKGCLLK 157
>UniRef50_A7S4J0 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 449
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 419 VFACNELDLSEVQVYGFDYDYTLAHYKPTMN 511
+FA NEL L + VYGFDYDYTLA Y T++
Sbjct: 1 IFANNELSLKYINVYGFDYDYTLASYSNTLH 31
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 514 LLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
L+Y+L LL + YP + ++Y P FAVRGLHYD G K
Sbjct: 33 LIYDLAVGNLLSFFGYPKGVEGMKYNPEFAVRGLHYDTVNGLLLK 77
>UniRef50_A5I9R3 Cluster: Cytosolic IMP-GMP specific
5'-nucleotidase; n=5; Proteobacteria|Rep: Cytosolic
IMP-GMP specific 5'-nucleotidase - Legionella
pneumophila (strain Corby)
Length = 459
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 508 EHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
E L+Y+L +E L E ++YP EI K ++ + A+RGL D + G K
Sbjct: 37 ESLVYDLVKERLAESFHYPEEIKKFKFNFDDAIRGLVIDSKNGNILK 83
>UniRef50_Q54XC1 Cluster: 5'-nucleotidase; n=1; Dictyostelium
discoideum AX4|Rep: 5'-nucleotidase - Dictyostelium
discoideum AX4
Length = 592
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 508 EHLLYNLGREYLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
E L Y++ + L++ YP I KL+Y PNF RGL D E G K
Sbjct: 136 EELAYDMVLDKLID-IGYPKSIRKLKYDPNFPTRGLFLDRELGNLLK 181
>UniRef50_Q22L12 Cluster: Putative uncharacterized protein; n=27;
Alveolata|Rep: Putative uncharacterized protein -
Tetrahymena thermophila SB210
Length = 2249
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 8 GEYYIILYNYATVCFKLR*CLK*LINPSYMEVLNKTNLF 124
G+Y +I+YN++ FK +K L NP Y+ VLNK N+F
Sbjct: 448 GDYSLIIYNFSKKTFKP--LMKLLSNPYYLNVLNKINMF 484
>UniRef50_Q9FI75 Cluster: Similarity to 5'-nucleotidase; n=8;
Magnoliophyta|Rep: Similarity to 5'-nucleotidase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 598
Score = 37.5 bits (83), Expect = 0.28
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 407 NPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
+P+G+F L+L + G+D DYTL HY
Sbjct: 138 SPRGIFCSRTLNLRSISAIGYDMDYTLMHY 167
>UniRef50_UPI0000E4A7FC Cluster: PREDICTED: similar to MGC108319
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC108319 protein,
partial - Strongylocentrotus purpuratus
Length = 439
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 413 KGVFACNELDLSEVQVYGFDYDYTLAHYK 499
K VF L + +++ +GFD DYTLA YK
Sbjct: 87 KRVFVNRSLSMEKIKFFGFDMDYTLAMYK 115
>UniRef50_A6FY99 Cluster: HAD superfamily (Subfamily IG) hydrolase,
5'-Nucleotidase; n=1; Plesiocystis pacifica SIR-1|Rep:
HAD superfamily (Subfamily IG) hydrolase,
5'-Nucleotidase - Plesiocystis pacifica SIR-1
Length = 516
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 419 VFACNELDLSEVQVYGFDYDYTLAHYK 499
VF +LD + V GFD DYTLA Y+
Sbjct: 30 VFTNRDLDFESIPVVGFDMDYTLARYR 56
>UniRef50_Q00YJ5 Cluster: Cytosolic IMP-GMP specific 5-nucleotidase,
putative; n=2; Ostreococcus|Rep: Cytosolic IMP-GMP
specific 5-nucleotidase, putative - Ostreococcus tauri
Length = 549
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 419 VFACNELDLSEVQVYGFDYDYTLAHYKP 502
VF L++ + GFD DYTLA YKP
Sbjct: 50 VFCNRSLNMKRIDAIGFDMDYTLAMYKP 77
>UniRef50_Q86YG4 Cluster: 5'-nucleotidase domain-containing protein
4; n=8; Theria|Rep: 5'-nucleotidase domain-containing
protein 4 - Homo sapiens (Human)
Length = 445
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 410 PKGVFACNELDLSEVQVYGFDYDYTLAHYK 499
P +F L L +++ +GFD DYTLA YK
Sbjct: 19 PAWIFVNRSLALGKIRCFGFDMDYTLAAYK 48
>UniRef50_Q7RQE1 Cluster: Protein factor associated with
neutral-sphingomyelinase activation; n=3; Plasmodium
(Vinckeia)|Rep: Protein factor associated with
neutral-sphingomyelinase activation - Plasmodium yoelii
yoelii
Length = 1490
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -3
Query: 387 LDLHLSLVRQYASFNSSLVEYFFKDKALFT-SQYFNVF*IK-PVREV*LQEINYQPN*LT 214
++ + +V+ Y +FNSS+ + K+K L+T S +F I+ P + V L N N T
Sbjct: 1069 VETNFEIVQTYDNFNSSIKDIELKNKLLYTRSDKIQLFDIRMPPKNV-LNNSNQILNHFT 1127
Query: 213 KTFLPKVLNYCKIIINALIASSSYS 139
T NY IIN + + +S
Sbjct: 1128 NTINTSRQNYINNIINEINIGNYFS 1152
>UniRef50_UPI0000F32D71 Cluster: 5'-nucleotidase domain-containing
protein 4; n=1; Bos taurus|Rep: 5'-nucleotidase
domain-containing protein 4 - Bos Taurus
Length = 473
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 490 TL*THNEHLLYNLGREYLLEKY---NYPPEILKLEYKPNFAVRGLHYDIEKGTSFK 648
TL +N L + LLE+ YP EIL+ Y P F RGL +++ G K
Sbjct: 24 TLAVYNSPAYETLAFKLLLERLVCIGYPHEILRYTYDPTFPTRGLVFNVLYGNLLK 79
>UniRef50_Q2QWW4 Cluster: HAD superfamily hydrolase, 5'-Nucleotidase
containing protein, expressed; n=2; Oryza sativa|Rep:
HAD superfamily hydrolase, 5'-Nucleotidase containing
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 905
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 419 VFACNELDLSEVQVYGFDYDYTLAHYKPTMNTCSIILVENIC*RSTITLQKY*NWNTNPI 598
+F +++ +++ GF +YTL +YK T + + + +K WN N
Sbjct: 382 IFCSRTVNMEDIKAIGFKMEYTLINYKVTFENLAYVEAKKRLVNGKYP-EKILEWNYNSE 440
Query: 599 LLFEVYIMTLKRGLLLKL 652
+ I+ K+G ++K+
Sbjct: 441 HMIRGLIIDKKKGNIIKV 458
>UniRef50_Q1CWL9 Cluster: HAD superfamily (Subfamily IG) hydrolase,
5'-nucleotidase; n=3; Bacteria|Rep: HAD superfamily
(Subfamily IG) hydrolase, 5'-nucleotidase - Myxococcus
xanthus (strain DK 1622)
Length = 502
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 392 LPQDVNPKGVFACNELDLSEVQVYGFDYDYTLAHY 496
+P +G+F L+L ++ G+D DYTL HY
Sbjct: 5 IPGPPPERGLFCNRTLNLRAIKAVGYDMDYTLIHY 39
>UniRef50_Q8FA10 Cluster: Adenylate cyclase; n=4; Leptospira|Rep:
Adenylate cyclase - Leptospira interrogans
Length = 758
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Frame = -2
Query: 511 VHCGFIVCQGIVIVKSIYLYFRKVQFIARKNTFRINIL-----------WKLFGSTFE 371
VH F +CQ + I S+Y+ F +Q + +K IL W+L+GS FE
Sbjct: 355 VHIAFKICQILAICFSVYILFFSIQTVRKKKQDARKILVGICVCIVFSTWELYGSVFE 412
>UniRef50_Q22DQ0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 7187
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -3
Query: 471 SNPYTCTSERSNSLHAKTPLGLTSCGSFLDLHLSLVRQYASFNSSLVEYFFKD 313
SNP T T+ R+ S HA+ L S S+L S V + F L + F +D
Sbjct: 397 SNPITSTNFRAKSSHARLKQPLNSDSSYLQNSPSNVEKENQFKKYLAQKFIED 449
>UniRef50_O67125 Cluster: DNA polymerase III subunit alpha; n=1;
Aquifex aeolicus|Rep: DNA polymerase III subunit alpha -
Aquifex aeolicus
Length = 1161
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 538 YLLEKYNYPPEILKLEYKPNFAVRGLHYDIEKGTSFKT 651
YLL KY+ PP+ EY A +GL IE+G + T
Sbjct: 296 YLLPKYDVPPDKTLEEYLRELAYKGLRQRIERGQAKDT 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,722,172
Number of Sequences: 1657284
Number of extensions: 12958513
Number of successful extensions: 29770
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29759
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -