Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060194.seq
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.8  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   8.4  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.4  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   8.4  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   8.4  
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 149  VLTAFVYKQKD*SYLKLPYKMGLLIISSINVT*NKLLHNCKEL 21
            +L  ++ + +  SY+ L  K    II  + VT   ++HNC+ L
Sbjct: 2405 ILPCYMQQIQSSSYIPLEGKCERDIILQLAVTIRTMVHNCEGL 2447


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 EYLLEKYNYPPEILKLEY 588
           ++LLEK  YP E++ L Y
Sbjct: 199 QWLLEKLGYPWEMMPLMY 216


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 EYLLEKYNYPPEILKLEY 588
           ++LLEK  YP E++ L Y
Sbjct: 199 QWLLEKLGYPWEMMPLMY 216


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 EYLLEKYNYPPEILKLEY 588
           ++LLEK  YP E++ L Y
Sbjct: 175 QWLLEKLGYPWEMMPLMY 192


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 535 EYLLEKYNYPPEILKLEY 588
           ++LLEK  YP E++ L Y
Sbjct: 175 QWLLEKLGYPWEMMPLMY 192


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +3

Query: 177 FYN--NSKLSVKMSLLISSVGNLFLGVKPL 260
           FYN   +K+   +S L   +GNLF GVK L
Sbjct: 186 FYNVTGTKVDYTISGLRLHMGNLFEGVKVL 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,053
Number of Sequences: 2352
Number of extensions: 14649
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)