Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060193.seq
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    24   4.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.5  

>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 273 LWALALLKCRYLCSQQTDE 329
           L+ +  L C Y C  QTD+
Sbjct: 7   LFVIVTLSCLYFCEAQTDK 25


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 165  NLSYIPTTVLSRIDI-FSNHSKIKLPFIISSTWQRRG 272
            ++S+IP+T   RIDI     S + +PF  +     RG
Sbjct: 1462 DISFIPSTTHGRIDIDHIRFSPLSMPFAANIYEPARG 1498


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 17/74 (22%), Positives = 38/74 (51%)
 Frame = +3

Query: 27  KHDKYVNIKLLIDHLITSTLMLKIRNVIRRRCLFSVRYFRPYQNSCNLSYIPTTVLSRID 206
           + D +V I  + + ++TST ++    V   RC+  +R F+  +   +LS +  ++L+ I 
Sbjct: 551 RFDCFVVIGSIGEMILTSTQIMPPLGVSVLRCVRLLRVFKVTKYWQSLSNLVASLLNSIQ 610

Query: 207 IFSNHSKIKLPFII 248
             ++   +   FI+
Sbjct: 611 SIASLLLLLFLFIV 624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,618
Number of Sequences: 2352
Number of extensions: 15415
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)