Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060192.seq
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   0.95 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.8  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   6.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   6.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   6.7  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 396 PSLDRGHLLKEIFPDNKSHGGNECNDR 316
           P    G  LK+  PD  S G  +CN +
Sbjct: 54  PCTSEGRELKKTLPDALSSGCTKCNQK 80


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -3

Query: 471 QIAESNKIQEGPECRKT*VSQHIMLPSLDRGHLLKEIFPDNKSHGGNECN 322
           ++  SN I EGP+  K      ++L   +  + L  +    + H G  C+
Sbjct: 90  EVVLSNAIAEGPDAEKALQRAALILRLREGMNSLSRVLKSIEKHQGAVCH 139


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 444 LVFC--WILLFVQCLGQN*EAANRTA 515
           L FC  W+L+ V    +  ++AN+TA
Sbjct: 324 LCFCFYWLLVMVAMFSRTQQSANKTA 349


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 444 LVFC--WILLFVQCLGQN*EAANRTA 515
           L FC  W+L+ V    +  ++AN+TA
Sbjct: 280 LCFCFYWLLVMVAMFSRTQQSANKTA 305


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 520 TCRALLHSASSPYLLGWPALSSLSTVPH 603
           T   L ++ +SPY +  P  +SLS  PH
Sbjct: 256 TRTTLKNNRASPYPMQRPKSASLSPPPH 283


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/40 (30%), Positives = 14/40 (35%)
 Frame = +1

Query: 487 KTEKPPIERRTTCRALLHSASSPYLLGWPALSSLSTVPHG 606
           KT  PP E    C A +   S    +         T PHG
Sbjct: 35  KTTPPPEEDNRGCAASVGEGSFYLPMNMQGFVKQQTAPHG 74


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 173 HEAFE*KPEGQT-RLQLFHHHTH 108
           H+  +  PE Q    Q++HHH+H
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 173 HEAFE*KPEGQT-RLQLFHHHTH 108
           H+  +  PE Q    Q++HHH+H
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 375 LLKEIFPDNKSHGGNECND 319
           +L+++ PD    G  +CND
Sbjct: 59  ILRDVIPDALITGCRKCND 77


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 134 LQLFHHHTHRKYPF 93
           L L H H H  YPF
Sbjct: 203 LNLHHWHWHLVYPF 216


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 628 RSERRISAHAEPLKAKKAQATQANME 551
           R+ RR+    E  K   + ATQA++E
Sbjct: 86  RALRRLRTQCERAKRTLSSATQASIE 111


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 628 RSERRISAHAEPLKAKKAQATQANME 551
           R+ RR+    E  K   + ATQA++E
Sbjct: 86  RALRRLRTQCERAKRTLSSATQASIE 111


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 375 LLKEIFPDNKSHGGNECND 319
           +L+++ PD    G  +CND
Sbjct: 59  ILRDVIPDALITGCRKCND 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,049
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)