Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060191.seq
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.7  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   3.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   9.1  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   9.1  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   9.1  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 377  VGSSSSRYQINIEFQLCMTRFGNAIFISFLLVDNNTS 267
            +GS  SR   ++ F LC    G+  F  +L  +  TS
Sbjct: 901  IGSWQSRKHGDVSFHLCQVLSGHGFFRDYLCRNGFTS 937


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 201 QCCGIGRFTFRCHYHLFFN 145
           +CCG+   +F C+Y+ + N
Sbjct: 127 KCCGLAFESFLCYYYNYGN 145


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 263 ITTAICILSLASGSTAFLST 204
           +T+A C+L  A+  T FLS+
Sbjct: 499 VTSAACVLGPANPKTNFLSS 518


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 411 KPQMTPNERPYEAQAFFREL 470
           +PQ +   +P++AQ F R L
Sbjct: 152 QPQQSTPPQPFDAQEFIRSL 171


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 411 KPQMTPNERPYEAQAFFREL 470
           +PQ +   +P++AQ F R L
Sbjct: 152 QPQQSTPPQPFDAQEFIRSL 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,787
Number of Sequences: 2352
Number of extensions: 10932
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)