Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060191.seq
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39318-1|AAA91461.1|  147|Homo sapiens UbcH5C protein.                 30   6.5  
U39317-1|AAA91460.1|  147|Homo sapiens UbcH5B protein.                 30   6.5  
L40146-1|AAC41750.1|  147|Homo sapiens ubiquitin conjugating enz...    30   6.5  
CR456916-1|CAG33197.1|  147|Homo sapiens UBE2D3 protein.               30   6.5  
BC066917-1|AAH66917.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
BC037894-1|AAH37894.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
BC033349-1|AAH33349.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
BC004104-1|AAH04104.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
BC003395-1|AAH03395.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
AY651263-1|AAX35690.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
AK095822-1|BAC04632.1|  148|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AK001446-1|BAA91697.1|  147|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AF317220-1|AAK93958.1|  118|Homo sapiens ubiquitin-conjugating e...    30   6.5  
AF213884-3|AAF35234.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  
AF125044-1|AAD31180.1|  147|Homo sapiens ubiquitin-conjugating e...    30   6.5  

>U39318-1|AAA91461.1|  147|Homo sapiens UbcH5C protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>U39317-1|AAA91460.1|  147|Homo sapiens UbcH5B protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>L40146-1|AAC41750.1|  147|Homo sapiens ubiquitin conjugating enzyme
           protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>CR456916-1|CAG33197.1|  147|Homo sapiens UBE2D3 protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>BC066917-1|AAH66917.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 3 (UBC4/5 homolog, yeast) protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>BC037894-1|AAH37894.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 3 (UBC4/5 homolog, yeast) protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>BC033349-1|AAH33349.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 2 (UBC4/5 homolog, yeast) protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>BC004104-1|AAH04104.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 4 (putative) protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>BC003395-1|AAH03395.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 3 (UBC4/5 homolog, yeast) protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>AY651263-1|AAX35690.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2 D2 transcript variant 1 protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>AK095822-1|BAC04632.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38503 fis, clone HCHON2000056, highly similar to
           UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19).
           ).
          Length = 148

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>AK001446-1|BAA91697.1|  147|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10584 fis, clone NT2RP2003737, highly similar to
           UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19).
           ).
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>AF317220-1|AAK93958.1|  118|Homo sapiens ubiquitin-conjugating
           enzyme protein.
          Length = 118

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 4   WQATIMGPNDSPYQGGVFFLTIHFPTDYP 32


>AF213884-3|AAF35234.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme E2D 3 protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


>AF125044-1|AAD31180.1|  147|Homo sapiens ubiquitin-conjugating
           enzyme HBUCE1 protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 WFKPQMTPNERPYEAQAFFRELDSPXDFP 491
           W    M PN+ PY+   FF  +  P D+P
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYP 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,748,706
Number of Sequences: 237096
Number of extensions: 1591412
Number of successful extensions: 2355
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)