Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060191.seq
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023715-1|AAY85115.1|  641|Drosophila melanogaster GH20002p pro...    90   2e-18
AY119523-1|AAM50177.1|  641|Drosophila melanogaster GH15213p pro...    90   2e-18
AE014298-1210|AAS65292.1|  641|Drosophila melanogaster CG12065-P...    90   2e-18
AE014298-1209|AAS65291.1|  641|Drosophila melanogaster CG12065-P...    90   2e-18
AE014298-1208|AAN09237.1|  687|Drosophila melanogaster CG12065-P...    90   2e-18
AE014298-1207|AAF46394.1|  687|Drosophila melanogaster CG12065-P...    90   2e-18

>BT023715-1|AAY85115.1|  641|Drosophila melanogaster GH20002p
           protein.
          Length = 641

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


>AY119523-1|AAM50177.1|  641|Drosophila melanogaster GH15213p
           protein.
          Length = 641

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


>AE014298-1210|AAS65292.1|  641|Drosophila melanogaster CG12065-PD,
           isoform D protein.
          Length = 641

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


>AE014298-1209|AAS65291.1|  641|Drosophila melanogaster CG12065-PC,
           isoform C protein.
          Length = 641

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


>AE014298-1208|AAN09237.1|  687|Drosophila melanogaster CG12065-PB,
           isoform B protein.
          Length = 687

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


>AE014298-1207|AAF46394.1|  687|Drosophila melanogaster CG12065-PA,
           isoform A protein.
          Length = 687

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +3

Query: 252 SGGDHTGIIINKQETY-ENGVSEPCHAQLEFYVYLVSGATGTHTREARALRFWFKPQMTP 428
           +GGDHTGIIINK     +   S+     LEF V+LVS  TG H++E+R LRFWF+  +T 
Sbjct: 114 AGGDHTGIIINKDTVAGQKSASKAAALSLEFRVFLVSANTGKHSQESRTLRFWFRDWLTN 173

Query: 429 NER-PYEAQAFFRELDSPXDFPKDYXXII 512
            E+  + AQ FF+EL SP DFP+DY   I
Sbjct: 174 EEKQAHIAQDFFKELVSPQDFPRDYVGFI 202



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +1

Query: 151 EKVIMTPKCKTANSTTLVVERKAVEPEASDKIHIA 255
           E+V+MTP+ KTANST +++ERK V+ E +D++H+A
Sbjct: 81  EQVVMTPRGKTANSTVILIERKLVD-EINDRVHVA 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,455,441
Number of Sequences: 53049
Number of extensions: 470458
Number of successful extensions: 866
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)