Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060190.seq
(643 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.8
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.8
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.8
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.8
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.8
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.8
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.8
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 22 4.9
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 8.6
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 80 RSTPPLSTPSNSNATKSSGL 99
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 434 RVTPPMSMFSTASXTVTSGL 375
R TPP+S S ++ T +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 21.8 bits (44), Expect = 4.9
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 211 STGDARRSGENFTSRVHAGILARLSDSDQEDMKRQK--YEMISVVVCNLYPFVQTVSKPD 384
++GD GE+F +V + + ++D++ K + + V + +V K
Sbjct: 49 TSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTT 108
Query: 385 VTVXDAVENIDIGGVTLLRA 444
+T+ + + + D TL RA
Sbjct: 109 LTIENLLADYDF-SETLTRA 127
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -2
Query: 228 PSISGALVMSDTS*TVRPAFRSARGGTATGNQLQATF 118
PS++ A + D+ ++P + G T++ AT+
Sbjct: 174 PSVTAAPHLRDSPNYIKPQLHVSTGSTSSPTIASATY 210
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,059
Number of Sequences: 336
Number of extensions: 2758
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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