Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060190.seq
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    25   1.5  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        23   6.2  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   6.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.2  

>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 215 VLS*CPTHLEL*GRRSEAPVAVPPLAINCRPHSDRLFANESRPV 84
           VL  CP   +L GR  +APV +PP     +   DR+   E  P+
Sbjct: 81  VLVCCPLVRKLTGR-FDAPVELPPPGECGKMQMDRIVGGEVAPI 123


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 55  KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERR 177
           KL  +  +D T  +SLA  LSEC L +I S        E R
Sbjct: 13  KLEAMVANDST--VSLAPVLSECLLNVIFSTTLGANVVEER 51


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 189 KMCRTSREHRRCSEVG*KLYI-QGTCWDLSSI 281
           K CR +++  RCSE+   ++  +G C   +++
Sbjct: 185 KACRYAKQPERCSEIFQSIFTDEGLCCTFNTL 216


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 189 KMCRTSREHRRCSEVG*KLYI-QGTCWDLSSI 281
           K CR +++  RCSE+   ++  +G C   +++
Sbjct: 185 KACRYAKQPERCSEIFQSIFTDEGLCCTFNTL 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,466
Number of Sequences: 2352
Number of extensions: 11850
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)