Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060189.seq
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 84 8e-17
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 84 8e-17
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 36 0.021
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 36 0.027
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 36 0.027
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 32 0.44
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.1
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 9.5
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 84.2 bits (199), Expect = 8e-17
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = +2
Query: 257 CEVYRQRCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMR 436
C++YR+RCLC S +C V +EY G C+++ +CTE M+ FP RM DWLF +M+
Sbjct: 103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMK 162
Query: 437 DMAERRELTPHYLKMER---EAESNLTVVGPMPLYGNGAIWTLRPMIDSCPVTSCSPLEL 607
++ +RREL H L+ E EAE++ P+ +P S P+
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220
Query: 608 R*WALEHCNRAISWXRCDADDDXRV 682
+E C + CDA++D +
Sbjct: 221 PVIPMESCIKPF-LEGCDANNDGNI 244
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 PCLKVHCSAXRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSI 257
PC C + C + + G+ C CI CP + D VC N N+T+ S+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSL 102
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 84.2 bits (199), Expect = 8e-17
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = +2
Query: 257 CEVYRQRCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMR 436
C++YR+RCLC S +C V +EY G C+++ +CTE M+ FP RM DWLF +M+
Sbjct: 103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMK 162
Query: 437 DMAERRELTPHYLKMER---EAESNLTVVGPMPLYGNGAIWTLRPMIDSCPVTSCSPLEL 607
++ +RREL H L+ E EAE++ P+ +P S P+
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220
Query: 608 R*WALEHCNRAISWXRCDADDDXRV 682
+E C + CDA++D +
Sbjct: 221 PVIPMESCIKPF-LEGCDANNDGNI 244
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 PCLKVHCSAXRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSI 257
PC C + C + + G+ C CI CP + D VC N N+T+ S+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSL 102
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPCVTASRTVPTRQTPDAWC 225
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 226 AQTSTKP--GNRLRSIPPAMLMPRQL*SVPWSAIPPRSNRVLRNVP 357
T T P ++S P P + S P + P + + P
Sbjct: 319 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 364
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = +1
Query: 52 FSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 231
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 232 TSTKP--GNRLRSIPPAMLMPRQL*SVPWSAIPPRSNRVLRNVP 357
T T P ++S P P + S P + P + + P
Sbjct: 207 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 250
Score = 31.1 bits (67), Expect = 0.77
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQXVSAKSTNTETPCVTASRTVPTRQTPDAW 222
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255
Query: 223 CAQTSTKP--GNRLRSIPPAMLMPRQL*SVPWSAIPPRSNRVLRNVP 357
T T P ++S P P + S P + +S P
Sbjct: 256 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTP 302
Score = 31.1 bits (67), Expect = 0.77
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQXVSAKSTNTETPCVTASRTVPTRQTPDAW 222
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369
Query: 223 CAQTSTKP--GNRLRSIPPAMLMPRQL*SVPWSAIPPRSNRVLRNVP 357
T T P ++S P P + S P + +S P
Sbjct: 370 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTP 416
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPCVTASRTVPTRQT 210
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 117 KVHCSAXRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSIAKYTASDAYAST 293
K C C + E+ A C C DCP YE + + VC T+ S S + S
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 294 TLISA 308
+++A
Sbjct: 575 FVMTA 579
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 108 PCLKVHCSAXRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 254
PC K+ C C + A C C C D R VC ET+ +
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDN 414
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 117 KVHCSAXRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSIAKYTASDAYAST 293
K C C + E+ A C C DCP YE + + VC T+ S S + S
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 294 TLISA 308
+++A
Sbjct: 583 FVMTA 587
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 108 PCLKVHCSAXRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 254
PC K+ C C + A C C C D R VC ET+ +
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDN 422
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.44
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +1
Query: 40 ELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPCVTASRTVPTRQTPDA 219
E TT ST + T+ +T T ST+ + +ST+T T T T T ++
Sbjct: 216 ESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTT------TESTTES 269
Query: 220 WCAQTSTKPGNRLRSIP--PAMLMPRQL*SVPWSAIPPRSNRVLR-NVPRN 363
TST + S+P P +L+ L ++P +L+ ++P+N
Sbjct: 270 TTESTSTSTDSTTTSLPALPLILLQPSLPQNQLRSLPAHPLNLLQPSLPQN 320
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 171 MCNCIKDCPYETDSRRMVCTNFNETWQSIAKYTASDAYASTTLISAVVRNTTTFKSSITE 350
+CN +K + + R C + + TA+ A +TT+ AVV TT +++T
Sbjct: 169 ICNAVKLQDFVNANCRKTCKRCT-SGPTATTSTAAPAAPTTTVAPAVV-TTTAAPAAVTT 226
Query: 351 RAEKCLTALKARCLTSPVACGTGFL 425
A T + A T+ A T ++
Sbjct: 227 TAAVTTTTVAAAAATTTAAACTSYI 251
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 169 PCVTASRTVPTRQTPDAWCAQTSTKPGNRLRSIPPAMLMPRQL--*SVPWSAIPP 327
P + R PT QTP A A + NR +IPP + R + S+P S+ PP
Sbjct: 324 PDLNTMRPEPTAQTPPAPAAPPAAPALNRQSTIPPVAMTQRPMIPPSLP-SSTPP 377
>Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical
protein F59B10.3 protein.
Length = 169
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 416 WLFNIMRDMAERRELTPHYLKMEREAESNLTVVGPMPLY 532
WLFN +D ++REL HY E S L P P +
Sbjct: 115 WLFNRSKDKQQKRELYEHY---EENNYSGLPTPQPTPTH 150
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPC---VTASRTVPTRQTPD 216
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 217 AWCAQTSTKPGNRLRS 264
+ S+ P N + S
Sbjct: 369 I-TSTLSSLPDNAICS 383
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 46 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQXVSAKSTNTETPC---VTASRTVPTRQTPD 216
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 217 AWCAQTSTKPGNRLRS 264
+ S+ P N + S
Sbjct: 369 I-TSTLSSLPDNAICS 383
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +3
Query: 111 CLKVHCSAX-RVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNF-NETWQSIAKYTASDA 281
C VH S + + E D CNC+++ T R +C +F + S+ + +
Sbjct: 72 CCAVHDSCYDNIAQTQEGCDNKFCNCLRNAMTSTKDRYFMCADFVTDAACSLVRKFGHEH 131
Query: 282 YASTTLISAVVRNTTTFKSSITERAEKCLTALKARCL 392
Y + T + R T F + + A + L CL
Sbjct: 132 YGTRTPDN---RELTAFHPATNQTANREYNRLYKSCL 165
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 606 SSNGEQLVTGHESIIGLSVQIAPFPYS 526
+++ + + GH ++GLS + FPYS
Sbjct: 1814 AAHSKDQIQGHAGVLGLSAIVLAFPYS 1840
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,591,076
Number of Sequences: 27780
Number of extensions: 347080
Number of successful extensions: 1155
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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