Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060188.seq
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54HY5 Cluster: Ankyrin repeat-containing protein; n=1;...    35   2.0  
UniRef50_Q9BIU2 Cluster: Fibroin 1; n=1; Euagrus chisoseus|Rep: ...    34   2.6  
UniRef50_A0V649 Cluster: Ig-like, group 1 precursor; n=1; Delfti...    33   4.5  
UniRef50_Q28JC2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_A4AGU7 Cluster: Single-stranded DNA-binding protein; n=...    33   7.9  
UniRef50_A4S399 Cluster: Predicted protein; n=2; Ostreococcus|Re...    33   7.9  
UniRef50_A4HDE0 Cluster: Inositol polyphosphate phosphatase, put...    33   7.9  

>UniRef50_Q54HY5 Cluster: Ankyrin repeat-containing protein; n=1;
            Dictyostelium discoideum AX4|Rep: Ankyrin
            repeat-containing protein - Dictyostelium discoideum AX4
          Length = 1818

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -2

Query: 259  AFSASPFSAGESSGASSVPFSLPLLSAASTFLXGDF-LTGDSFGSVEVTSSGATSFLSTA 83
            +F   P ++G   G++++PF  P  S   +   G F  T  SFG  + T+ G++ F STA
Sbjct: 1580 SFGPKPIASG-GFGSTAIPFGGPGQSFGGSATSGGFGSTAQSFGGPKPTTIGSSGFGSTA 1638

Query: 82   AS 77
             S
Sbjct: 1639 VS 1640


>UniRef50_Q9BIU2 Cluster: Fibroin 1; n=1; Euagrus chisoseus|Rep:
           Fibroin 1 - Euagrus chisoseus
          Length = 734

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
 Frame = -2

Query: 259 AFSASPFSAGESSGASSVPFSLPLLSAASTF---LXGDFL----TGDSFGSVEVTSSGAT 101
           A +A+  +A  +SGASS   +    +AAS F   L GD L     G++FGS+  ++S A+
Sbjct: 399 AAAAAAAAAASASGASSASAAASASAAASAFSSALIGDLLGIGVFGNTFGSIG-SASAAS 457

Query: 100 SFLSTAASAIVA 65
           S  S AA A ++
Sbjct: 458 SIASAAAQAALS 469


>UniRef50_A0V649 Cluster: Ig-like, group 1 precursor; n=1; Delftia
            acidovorans SPH-1|Rep: Ig-like, group 1 precursor -
            Delftia acidovorans SPH-1
          Length = 1532

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = -2

Query: 265  IVAFSASPFSAGESSGASSVPFSLPLLSAASTFLXGDFLTGDSFGSVEVTSS--GATSFL 92
            + AFS +  S    +GA +V FS+    AA   + G+ LT +  GS  VT++  G  ++ 
Sbjct: 928  LAAFSTAALSTSGGAGAGAVGFSI-TDGAAFCSVNGNTLTAEGTGSCTVTATKLGDANYQ 986

Query: 91   STAASAIV 68
             T A+ +V
Sbjct: 987  DTLATTVV 994


>UniRef50_Q28JC2 Cluster: Putative uncharacterized protein; n=1;
           Jannaschia sp. CCS1|Rep: Putative uncharacterized
           protein - Jannaschia sp. (strain CCS1)
          Length = 224

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = -2

Query: 304 SLFLFCGITVLRCIVAFSASPFSAGESSGASSVPFSLPLLSAASTFLXGDFLTGDSFGSV 125
           S+  F G T L  + ++ A+    G +SGA++ P +L L SA +TF   D L G      
Sbjct: 74  SMSPFAG-TSLENVNSYFATRVRTGANSGATTSPVTLTLGSAITTF---DMLWGSIDDYN 129

Query: 124 EVTSSGATSFLSTAASAI 71
            +T SGA+  +S   + I
Sbjct: 130 TLTFSGASGSVSVTGTEI 147


>UniRef50_A4AGU7 Cluster: Single-stranded DNA-binding protein; n=1;
           marine actinobacterium PHSC20C1|Rep: Single-stranded
           DNA-binding protein - marine actinobacterium PHSC20C1
          Length = 156

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 198 ENGTDEAPEDSPAENGDAEK 257
           EN  D+AP+DSP++  DAEK
Sbjct: 135 ENAPDDAPDDSPSDESDAEK 154


>UniRef50_A4S399 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 1073

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 289 CGITVLRCIVAFSASPFSAGESSGASSVPFSLPLLSAASTFLXGD 155
           C I +LR + A   SP++   S  A++  F+L  LSAA + L  D
Sbjct: 765 CAIDLLRSVSALLESPYAGVRSLSATACSFALESLSAAESALTHD 809


>UniRef50_A4HDE0 Cluster: Inositol polyphosphate phosphatase,
            putative; n=1; Leishmania braziliensis|Rep: Inositol
            polyphosphate phosphatase, putative - Leishmania
            braziliensis
          Length = 2768

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -2

Query: 247  SPFSAGE-SSGASSVPFSLPLLSAASTFLXGDFLTG--DSFGSVEVTSSGATSFLSTAAS 77
            SP SA   +S AS++P  +   S +S  L G   T   D  G   + SS ATS LSTAA+
Sbjct: 1113 SPVSASTPTSDASTLPHMMQRSSVSSAVLQGSMSTMGLDDVGEAVIMSS-ATSTLSTAAA 1171

Query: 76   A 74
            A
Sbjct: 1172 A 1172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,404,311
Number of Sequences: 1657284
Number of extensions: 7538528
Number of successful extensions: 20287
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20270
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)