Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060188.seq
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro...    29   4.1  
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro...    29   4.1  
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ...    29   4.1  

>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p
           protein.
          Length = 1489

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 235 AGESSGASSVPFSLPLLSAASTFLXGDFLTGDSFGSVEVTSSGATS 98
           AG SSG S VP S    S+      GD   G  FG+   +SSG+ +
Sbjct: 658 AGGSSGGSGVPSSSGEASSRHLTGEGDGQGGGGFGNQNFSSSGSNN 703


>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p
           protein.
          Length = 1489

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 235 AGESSGASSVPFSLPLLSAASTFLXGDFLTGDSFGSVEVTSSGATS 98
           AG SSG S VP S    S+      GD   G  FG+   +SSG+ +
Sbjct: 658 AGGSSGGSGVPSSSGEASSRHLTGEGDGQGGGGFGNQNFSSSGSNN 703


>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
           protein.
          Length = 2296

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 235 AGESSGASSVPFSLPLLSAASTFLXGDFLTGDSFGSVEVTSSGATS 98
           AG SSG S VP S    S+      GD   G  FG+   +SSG+ +
Sbjct: 658 AGGSSGGSGVPSSSGEASSRHLTGEGDGQGGGGFGNQNFSSSGSNN 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,083,113
Number of Sequences: 53049
Number of extensions: 366935
Number of successful extensions: 1182
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)