Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060187.seq
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09374-1|AAA83414.1| 292|Drosophila melanogaster soluble NSF at... 132 5e-31
AY069477-1|AAL39622.1| 292|Drosophila melanogaster LD21601p pro... 132 5e-31
AE014296-3323|AAF49035.1| 292|Drosophila melanogaster CG6625-PA... 132 5e-31
AE014297-1095|AAF54495.1| 283|Drosophila melanogaster CG6208-PA... 31 1.7
AE014134-3567|ABI31337.1| 555|Drosophila melanogaster CG31703-P... 28 9.1
>U09374-1|AAA83414.1| 292|Drosophila melanogaster soluble NSF
attachment protein protein.
Length = 292
Score = 132 bits (318), Expect = 5e-31
Identities = 63/124 (50%), Positives = 77/124 (62%)
Frame = +2
Query: 251 QVAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYT 430
+++K W +AG+ FC AA LH +AG RHDA T +VDASNCYKK D AV+CL+K+I+IYT
Sbjct: 51 KMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYT 110
Query: 431 DMGRFTVAAKQHQNIAECTRRSALXXXXXXXXXXXXXXXXXXXXXXXXXNKCMLKLAHYA 610
DMGRFT+AAK HQ+IAE NKCMLK+A YA
Sbjct: 111 DMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYA 170
Query: 611 AQLE 622
AQLE
Sbjct: 171 AQLE 174
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 102 MADNEQKAMQLMAEAEXXXXXXXXXXXXXXXXXXXIEEAVDCYLRAANLFKWPRSGLKQG 281
M DNEQKA+QLMAEAE +E+A++CY RA N+FK ++ K G
Sbjct: 1 MGDNEQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAG 60
>AY069477-1|AAL39622.1| 292|Drosophila melanogaster LD21601p
protein.
Length = 292
Score = 132 bits (318), Expect = 5e-31
Identities = 63/124 (50%), Positives = 77/124 (62%)
Frame = +2
Query: 251 QVAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYT 430
+++K W +AG+ FC AA LH +AG RHDA T +VDASNCYKK D AV+CL+K+I+IYT
Sbjct: 51 KMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYT 110
Query: 431 DMGRFTVAAKQHQNIAECTRRSALXXXXXXXXXXXXXXXXXXXXXXXXXNKCMLKLAHYA 610
DMGRFT+AAK HQ+IAE NKCMLK+A YA
Sbjct: 111 DMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYA 170
Query: 611 AQLE 622
AQLE
Sbjct: 171 AQLE 174
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 102 MADNEQKAMQLMAEAEXXXXXXXXXXXXXXXXXXXIEEAVDCYLRAANLFKWPRSGLKQG 281
M DNEQKA+QLMAEAE +E+A++CY RA N+FK ++ K G
Sbjct: 1 MGDNEQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAG 60
>AE014296-3323|AAF49035.1| 292|Drosophila melanogaster CG6625-PA
protein.
Length = 292
Score = 132 bits (318), Expect = 5e-31
Identities = 63/124 (50%), Positives = 77/124 (62%)
Frame = +2
Query: 251 QVAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYT 430
+++K W +AG+ FC AA LH +AG RHDA T +VDASNCYKK D AV+CL+K+I+IYT
Sbjct: 51 KMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYT 110
Query: 431 DMGRFTVAAKQHQNIAECTRRSALXXXXXXXXXXXXXXXXXXXXXXXXXNKCMLKLAHYA 610
DMGRFT+AAK HQ+IAE NKCMLK+A YA
Sbjct: 111 DMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYA 170
Query: 611 AQLE 622
AQLE
Sbjct: 171 AQLE 174
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 102 MADNEQKAMQLMAEAEXXXXXXXXXXXXXXXXXXXIEEAVDCYLRAANLFKWPRSGLKQG 281
M DNEQKA+QLMAEAE +E+A++CY RA N+FK ++ K G
Sbjct: 1 MGDNEQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAG 60
>AE014297-1095|AAF54495.1| 283|Drosophila melanogaster CG6208-PA
protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 293 NAAQLHLKAGVRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYTDMGRFTVAAKQHQN 472
+AA + KAG+ AAT + A + K+ D CLLKAI+ Y + + AAK ++
Sbjct: 21 SAANEYAKAGMYFKAATAYRIAKSFDKRKD------CLLKAIDCYENNKSWFHAAKSYEQ 74
Query: 473 I 475
I
Sbjct: 75 I 75
>AE014134-3567|ABI31337.1| 555|Drosophila melanogaster CG31703-PB,
isoform B protein.
Length = 555
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 293 NAAQLHLKAGVR---HDAATNFVDASNCYKKCDANEAVSCLLKAIEIYTDMGRFTVAAK- 460
N Q H +R H + F+D + KC N + A++I+ + +VA +
Sbjct: 476 NCEQFHRPVNLRTHGHATVSAFLDDKQAFDKCIDNAKIYVAPAALKIWQMVENISVAVQP 535
Query: 461 QHQNIAECT 487
Q N+ CT
Sbjct: 536 QPPNLPYCT 544
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,008,351
Number of Sequences: 53049
Number of extensions: 465556
Number of successful extensions: 1177
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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