Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060186.seq
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   5.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 537  TIFYIPDLASSKXAXCQAVSKISKHKENC 451
            ++ ++PD A ++   CQ V  I   K +C
Sbjct: 1799 SVLWVPDHAVTRCTTCQTVFWIGLRKHHC 1827


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 537  TIFYIPDLASSKXAXCQAVSKISKHKENC 451
            ++ ++PD A ++   CQ V  I   K +C
Sbjct: 1800 SVLWVPDHAVTRCTTCQTVFWIGLRKHHC 1828


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -1

Query: 320 FAHYCAP*ITXASLPHNVIETYHTVRYKMS 231
           F H C P     +LPHN   TY    Y  S
Sbjct: 411 FRHNCRPLTPGGTLPHN--PTYFRTVYSSS 438


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,962
Number of Sequences: 2352
Number of extensions: 9667
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)