Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060182.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = -3

Query: 175 LQYVVLHRLTSVLYFLATMLVCEAQHIVVML*VYYYRSLYTIF 47
           L Y VL  L  + YF    ++    H+++++ +YY+  ++ +F
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTV-HLLLLVCIYYFYYMHLLF 268



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 89  YVVSLLLPISLHYFFNSH 36
           + V LLL + ++YF+  H
Sbjct: 248 FTVHLLLLVCIYYFYYMH 265


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 443 GGAAVVTILETLELMSQGGWRI 508
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 73  YYRSLYTIFLIVTQY 29
           YYR LYTI  +V  Y
Sbjct: 68  YYRRLYTITHLVLDY 82


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 73  YYRSLYTIFLIVTQY 29
           YYR LYTI  +V  Y
Sbjct: 68  YYRRLYTITHLVLDY 82


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 330 KVPHILFLLNCWSVCYHLSLXXVFNI 253
           ++   LFL  C + C +  +  VFNI
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNI 336


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 330 KVPHILFLLNCWSVCYHLSLXXVFNI 253
           ++   LFL  C + C +  +  VFNI
Sbjct: 311 RIQKALFLFACTNSCMNPVVYGVFNI 336


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 681 RRCNTGFWILRTNVTYNST 625
           +R    ++ L TN+TYN+T
Sbjct: 33  KRMMRSWYYLLTNLTYNNT 51


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 81  HNITTICCASQTNIVARK*RTLVSL 155
           HN+TT+C     ++V +   TL  L
Sbjct: 125 HNLTTLCQELGISVVQKVSHTLYHL 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,088
Number of Sequences: 336
Number of extensions: 3856
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)