Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060181.seq
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 422 IVCTYKQWLWGILLFITLFMYYSRIFF 342
           ++CTY  +   I+L    + YY+ I F
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIF 123


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 455  DRLQFASNFENIVCTYKQWLW 393
            + L+  S +  IVC +  W W
Sbjct: 1389 EELKPQSGYFKIVCYFTNWAW 1409


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 129  FGRLKNSEYHLKVN 170
            FGR +  E+HLK++
Sbjct: 1051 FGREEGKEHHLKIS 1064


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 145 FFNLPKILFFFENF 104
           FF +P++L +F+ F
Sbjct: 220 FFTVPRVLMYFDIF 233


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 410 YKQWLWGILLFITLFMYYSRIFFNNTVFSNY 318
           Y Q+L+G ++++ L    S+    + + +NY
Sbjct: 137 YSQFLYGFMIYLILDTIKSKYRQMHRLLANY 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,757
Number of Sequences: 336
Number of extensions: 2891
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)