Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060181.seq
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    29   0.098
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    29   0.17 
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          24   4.9  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    24   4.9  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   6.5  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 29.5 bits (63), Expect = 0.098
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 51  ILKLINFFDLFTKFVMP*KFSKKNRIFGRLKNSEYHLKVNLTSQE 185
           I+ L+  F ++T FV    FSK   IFG   +  Y+    +T++E
Sbjct: 442 IILLMGIFSMYTGFVYNDVFSKGMNIFGSAWSVNYNTSTVMTNKE 486


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 51  ILKLINFFDLFTKFVMP*KFSKKNRIFGRLKNSEYHLKVNLTSQE 185
           I+ L+  F ++T FV    FSK   IFG   +  Y+    +T+++
Sbjct: 452 IILLMGLFSMYTGFVYNDIFSKSMNIFGSAWSVNYNTSTVMTNKD 496


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 317 NRSAFSYNADSRMNNCTSSYGI 252
           N SAFS +A ++  N ++ YGI
Sbjct: 51  NESAFSTSATNKNKNGSTDYGI 72


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 317 NRSAFSYNADSRMNNCTSSYGI 252
           N SAFS +A ++  N ++ YGI
Sbjct: 51  NESAFSTSATNKNKNGSTDYGI 72


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 535 NRSSLYINSSPDISRQYSDLG 597
           NR    + S  D+ RQ+ DLG
Sbjct: 58  NRMKFLLESLADLDRQFRDLG 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,143
Number of Sequences: 2352
Number of extensions: 11566
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)