Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060181.seq
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023827-1|AAZ86748.1| 185|Drosophila melanogaster RE42959p pro... 50 4e-06
AE014134-3051|AAF53769.1| 185|Drosophila melanogaster CG17347-P... 50 4e-06
U21218-1|AAB49735.1| 457|Drosophila melanogaster zeste-white 4 ... 29 4.2
U15602-1|AAB49734.1| 457|Drosophila melanogaster zeste-white 4 ... 29 4.2
AL138972-10|CAB72293.1| 457|Drosophila melanogaster EG:BACR25B3... 29 4.2
AF233288-2|AAF43419.1| 457|Drosophila melanogaster egghead prot... 29 4.2
AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown prot... 29 4.2
AE014298-416|AAN09081.1| 457|Drosophila melanogaster CG9659-PC,... 29 4.2
AE014298-415|AAF45792.1| 457|Drosophila melanogaster CG9659-PB,... 29 4.2
AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-P... 29 4.2
AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-P... 29 4.2
BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p pro... 28 9.8
AY157148-1|AAN71718.1| 285|Drosophila melanogaster small conduc... 28 9.8
AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF... 28 9.8
>BT023827-1|AAZ86748.1| 185|Drosophila melanogaster RE42959p
protein.
Length = 185
Score = 49.6 bits (113), Expect = 4e-06
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +3
Query: 240 LRG*YTIGGGTVIHPRVSXXXXXXXXXXXXXXXXXXXSTIIHK-KSDKQENPPKPLFIGA 416
LRG T G V+HP + +T+ H+ + + L IG
Sbjct: 21 LRGDITFSSGCVVHPSATVIADAGPIIIGENCIIEEYATVAHRLEPGAVWDVNNILSIGT 80
Query: 417 HNVFEVACKLESIYGHVGESNVFECRSFVGEKSKLA--VVV**EQPVH*QLPRY*QTIQ* 590
HNVFEV C++E+ +G+ NVFE + +VG ++ VV +H TI
Sbjct: 81 HNVFEVGCQVEA--AKIGDKNVFESKCYVGPGVTVSSGCVVGAGIKIHGSQRLPENTIV- 137
Query: 591 SGAQSIMLEEALEKQPSQLLQ 653
G Q + EA++KQ SQ LQ
Sbjct: 138 YGEQGLQ-REAIDKQGSQTLQ 157
Score = 33.9 bits (74), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 512 VKVGSGCVIGAACTLTAPQILADNTVIWGSE 604
V V SGCV+GA + Q L +NT+++G +
Sbjct: 111 VTVSSGCVVGAGIKIHGSQRLPENTIVYGEQ 141
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 193 HNIKILPGATVCEDCTLEGDI 255
+ IKILP A VCE+ +L GDI
Sbjct: 5 NRIKILPKAVVCEESSLRGDI 25
>AE014134-3051|AAF53769.1| 185|Drosophila melanogaster CG17347-PA
protein.
Length = 185
Score = 49.6 bits (113), Expect = 4e-06
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +3
Query: 240 LRG*YTIGGGTVIHPRVSXXXXXXXXXXXXXXXXXXXSTIIHK-KSDKQENPPKPLFIGA 416
LRG T G V+HP + +T+ H+ + + L IG
Sbjct: 21 LRGDITFSSGCVVHPSATVIADAGPIIIGENCIIEEYATVAHRLEPGAVWDVNNILSIGT 80
Query: 417 HNVFEVACKLESIYGHVGESNVFECRSFVGEKSKLA--VVV**EQPVH*QLPRY*QTIQ* 590
HNVFEV C++E+ +G+ NVFE + +VG ++ VV +H TI
Sbjct: 81 HNVFEVGCQVEA--AKIGDKNVFESKCYVGPGVTVSSGCVVGAGIKIHGSQRLPENTIV- 137
Query: 591 SGAQSIMLEEALEKQPSQLLQ 653
G Q + EA++KQ SQ LQ
Sbjct: 138 YGEQGLQ-REAIDKQGSQTLQ 157
Score = 33.9 bits (74), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 512 VKVGSGCVIGAACTLTAPQILADNTVIWGSE 604
V V SGCV+GA + Q L +NT+++G +
Sbjct: 111 VTVSSGCVVGAGIKIHGSQRLPENTIVYGEQ 141
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 193 HNIKILPGATVCEDCTLEGDI 255
+ IKILP A VCE+ +L GDI
Sbjct: 5 NRIKILPKAVVCEESSLRGDI 25
>U21218-1|AAB49735.1| 457|Drosophila melanogaster zeste-white 4
protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>U15602-1|AAB49734.1| 457|Drosophila melanogaster zeste-white 4
protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>AL138972-10|CAB72293.1| 457|Drosophila melanogaster
EG:BACR25B3.8,FBgn0001404;egh protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>AF233288-2|AAF43419.1| 457|Drosophila melanogaster egghead
protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown
protein.
Length = 834
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = -2
Query: 344 FNNTVFSNYNRSAFSYNADSRMNNCTSSYGISPSKVQSSQTVAPGRILML*AIFLRCKVY 165
F + F+NYN + N + ++ +S+ G+ P + +A +I+ L + ++ +
Sbjct: 475 FGSRWFNNYNTTTVLTNPNLQLPPNSSAVGVYPFGMDPVWQLADNKIIFLNSFKMKLSII 534
Query: 164 FKMIFRIF 141
F ++ +F
Sbjct: 535 FGVLHMVF 542
>AE014298-416|AAN09081.1| 457|Drosophila melanogaster CG9659-PC,
isoform C protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>AE014298-415|AAF45792.1| 457|Drosophila melanogaster CG9659-PB,
isoform B protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 530 CVIGAACTLTAPQILADNTVIWG 598
CV+GA CT+ ++ + VIWG
Sbjct: 414 CVLGAVCTIPVNVVIENVAVIWG 436
>AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-PB,
isoform B protein.
Length = 834
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = -2
Query: 344 FNNTVFSNYNRSAFSYNADSRMNNCTSSYGISPSKVQSSQTVAPGRILML*AIFLRCKVY 165
F + F+NYN + N + ++ +S+ G+ P + +A +I+ L + ++ +
Sbjct: 475 FGSRWFNNYNTTTVLTNPNLQLPPNSSAVGVYPFGMDPVWQLADNKIIFLNSFKMKLSII 534
Query: 164 FKMIFRIF 141
F ++ +F
Sbjct: 535 FGVLHMVF 542
>AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-PA,
isoform A protein.
Length = 834
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = -2
Query: 344 FNNTVFSNYNRSAFSYNADSRMNNCTSSYGISPSKVQSSQTVAPGRILML*AIFLRCKVY 165
F + F+NYN + N + ++ +S+ G+ P + +A +I+ L + ++ +
Sbjct: 475 FGSRWFNNYNTTTVLTNPNLQLPPNSSAVGVYPFGMDPVWQLADNKIIFLNSFKMKLSII 534
Query: 164 FKMIFRIF 141
F ++ +F
Sbjct: 535 FGVLHMVF 542
>BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p
protein.
Length = 288
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -2
Query: 341 NNTVFSNYN--RSAFSYNADSRMN-NCTSSYGISPSKVQSSQTVAPGRI 204
NN SNYN RS+ S N+D+ N NC+SS IS S+ T I
Sbjct: 16 NNNNSSNYNSKRSSSSNNSDTCNNLNCSSS-NISTETSDSNATTCSSNI 63
>AY157148-1|AAN71718.1| 285|Drosophila melanogaster small
conductance calcium-activatedpotassium channel SK splice
variant 6b protein.
Length = 285
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 497 FCWREVKVGSGCVIGAACTLTAPQILADNTVIWGSEHHVRRSFRETALS 643
+C R + V +G ++GA CT +++ + +E HV +T L+
Sbjct: 238 YCGRGIAVSTG-IMGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLT 285
>AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF,
isoform F protein.
Length = 924
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 497 FCWREVKVGSGCVIGAACTLTAPQILADNTVIWGSEHHVRRSFRETALS 643
+C R + V +G ++GA CT +++ + +E HV +T L+
Sbjct: 717 YCGRGIAVSTG-IMGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLT 764
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,844,605
Number of Sequences: 53049
Number of extensions: 490444
Number of successful extensions: 1221
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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