Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060181.seq
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 7.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.9
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 7.9
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
N T+ +N N ++YN ++ NNC Y
Sbjct: 87 NRTIHNN-NNYKYNYNNNNYNNNCKKLY 113
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
N T+ +N N ++YN ++ NNC Y
Sbjct: 87 NKTIHNN-NNYKYNYNNNNYNNNCKKLY 113
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
N T+ +N N ++YN ++ NNC Y
Sbjct: 87 NKTIHNN-NNYKYNYNNNNYNNNCKKLY 113
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
N T+ +N N ++YN ++ NNC Y
Sbjct: 87 NKTIHNN-NNYKYNYNNNNYNNNCKKLY 113
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNN 273
NN +SNYN +YN + NN
Sbjct: 320 NNYKYSNYNNYNNNYNNYNNYNN 342
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
NN +SNYN +YN ++ NN ++Y
Sbjct: 87 NNYKYSNYNNYNNNYN-NNYNNNYNNNY 113
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 341 NNTVFSNYNRSAFSYNADSRMNNCTSSY 258
NN +SNYN +YN ++ NN ++Y
Sbjct: 87 NNYKYSNYNNYNNNYN-NNYNNNYNNNY 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 208 LPGATVCEDCTLEGDIP*EEVQ 273
LP T CED ++ G+ EEV+
Sbjct: 444 LPLHTECEDLSVSGEAGIEEVK 465
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 208 LPGATVCEDCTLEGDIP*EEVQ 273
LP T CED ++ G+ EEV+
Sbjct: 444 LPLHTECEDLSVSGEAGIEEVK 465
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 344 FNNTVFSNYNRSAFSYN 294
+NN ++NYN + +YN
Sbjct: 96 YNNNNYNNYNYNNNNYN 112
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 356 SRIFFNNTVFSNYNRSAFSYN 294
++ NN ++NYN YN
Sbjct: 309 NKTIHNNNNYNNYNNKKLYYN 329
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 224 TVAPGRILML*AIFLRCK 171
T+APG++L AI CK
Sbjct: 158 TLAPGKVLGELAILYNCK 175
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,661
Number of Sequences: 438
Number of extensions: 3362
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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