Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060179.seq
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p pro...    29   5.9  
BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p pro...    29   5.9  
AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA...    29   5.9  

>BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p
           protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 193 LVR*DPKIPWARGLLPTLCRSLSPIYPRREHPVGGSAHGPKKKKICME 50
           L R +P+   +RG  PTLC  L   YP     + G+    K++ +C+E
Sbjct: 220 LARCNPRC--SRGRKPTLCTKLRAPYPCYSEKIRGTRPLRKRECLCLE 265


>BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p
           protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 193 LVR*DPKIPWARGLLPTLCRSLSPIYPRREHPVGGSAHGPKKKKICME 50
           L R +P+   +RG  PTLC  L   YP     + G+    K++ +C+E
Sbjct: 220 LARCNPRC--SRGRKPTLCTKLRAPYPCYSEKIRGTRPLRKRECLCLE 265


>AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA
           protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 193 LVR*DPKIPWARGLLPTLCRSLSPIYPRREHPVGGSAHGPKKKKICME 50
           L R +P+   +RG  PTLC  L   YP     + G+    K++ +C+E
Sbjct: 220 LARCNPRC--SRGRKPTLCTKLRAPYPCYSEKIRGTRPLRKRECLCLE 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,795,065
Number of Sequences: 53049
Number of extensions: 526947
Number of successful extensions: 937
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)