Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060178.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.2  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.5  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/48 (25%), Positives = 19/48 (39%)
 Frame = +3

Query: 6   RGELQHRPLLVDLTIEEGTRLKVIYGSADGFHAVDLDTATVYDIYIPK 149
           R   +H  LL+ +++       V Y        +D  T   +D Y PK
Sbjct: 197 RNAFRHDGLLLTMSVLPNVNSSVYYDPRALAPNLDFITLEAFDFYTPK 244


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 85  LQMASMLLIWTLPQYMIFIFQNM 153
           L +AS    W+   YM +IF N+
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANI 139


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 85  LQMASMLLIWTLPQYMIFIFQNM 153
           L +AS    W+   YM +IF N+
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANI 139


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 276 STIFLLTLRKC*HRRLHCHSTEATARR 196
           S ++  + R C +   +CHS +   RR
Sbjct: 282 SNVYRYSCRDCSYATKYCHSLKIHLRR 308



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 122 HSI*YLYSKTWINYSTLHCTSSKL 193
           HS  Y YS    +Y+T +C S K+
Sbjct: 281 HSNVYRYSCRDCSYATKYCHSLKI 304


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 276 STIFLLTLRKC*HRRLHCHSTEATARR 196
           S ++  + R C +   +CHS +   RR
Sbjct: 40  SNVYRYSCRDCSYATKYCHSLKIHLRR 66



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 122 HSI*YLYSKTWINYSTLHCTSSKL 193
           HS  Y YS    +Y+T +C S K+
Sbjct: 39  HSNVYRYSCRDCSYATKYCHSLKI 62


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 103 LLIWTLPQYMIFIFQNMDQLFHIALYL 183
           L IW   Q+M+    N D  + + L++
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTLFM 238


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 103 LLIWTLPQYMIFIFQNMDQLFHIALYL 183
           L IW   Q+M+    N D  + + L++
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTLFM 238


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 103 LLIWTLPQYMIFIFQNMDQLFHIALYL 183
           L IW   Q+M+    N D  + + L++
Sbjct: 212 LHIWPRGQFMMIALPNKDNSWTVTLFM 238


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 IALYLFQTLTACSCFCAMTMKASMLTLTE 255
           + +Y F     C CF  + +  +M + T+
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAMFSRTQ 342


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 IALYLFQTLTACSCFCAMTMKASMLTLTE 255
           + +Y F     C CF  + +  +M + T+
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAMFSRTQ 298


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 QNMDQLFHIALYLFQTLTAC 204
           +N+DQ    AL+LF    +C
Sbjct: 306 KNVDQRIQKALFLFACTNSC 325


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 QNMDQLFHIALYLFQTLTAC 204
           +N+DQ    AL+LF    +C
Sbjct: 306 KNVDQRIQKALFLFACTNSC 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,553
Number of Sequences: 336
Number of extensions: 4625
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)