Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060177.seq
(628 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41421 Cluster: Uncharacterized 40.1 kDa protein in PK1... 169 4e-41
UniRef50_Q65359 Cluster: Uncharacterized 37.2 kDa protein; n=8; ... 66 9e-10
UniRef50_Q65360 Cluster: ORF 1173; n=1; Orgyia pseudotsugata sin... 48 1e-04
UniRef50_Q4S102 Cluster: Chromosome 5 SCAF14773, whole genome sh... 37 0.34
UniRef50_A7HGZ8 Cluster: Heat shock protein DnaJ domain protein;... 34 3.2
UniRef50_A3TQX4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q4PGQ1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q7CRF1 Cluster: AGR_L_3540p; n=2; Agrobacterium tumefac... 33 7.4
UniRef50_Q4UGX2 Cluster: Possible ribonuclease ii family protein... 33 7.4
UniRef50_Q2YAA0 Cluster: NADH-quinone oxidoreductase; n=2; Bacte... 32 9.8
>UniRef50_P41421 Cluster: Uncharacterized 40.1 kDa protein in
PK1-LEF1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 40.1 kDa
protein in PK1-LEF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 340
Score = 169 bits (412), Expect = 4e-41
Identities = 85/114 (74%), Positives = 89/114 (78%)
Frame = +2
Query: 254 TTGIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFM 433
T GIDDNVR+VLEQIDAVVPVSVRVQ G QIFSLNNFEREISQDML CLQIILGRFE+FM
Sbjct: 90 TMGIDDNVREVLEQIDAVVPVSVRVQNGWQIFSLNNFEREISQDMLDCLQIILGRFEYFM 149
Query: 434 RNGKLLHIANVFNPNSDAVGWWYNKFVX*LMCTE*CIXACPPNWCLVLSEAVKK 595
RNGKLL IANVFNPN+D VGWWYNKF + P LSEAVKK
Sbjct: 150 RNGKLLRIANVFNPNNDVVGWWYNKFCVVTYVHRIMYRSVPAELVPRLSEAVKK 203
Score = 106 bits (255), Expect = 4e-22
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 10 IIYNYYAKYNEVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMR 156
IIYNYYAKYNEVHDVYGESYHH+RIVQEYLSESYVN MSCIERDVTAMR
Sbjct: 8 IIYNYYAKYNEVHDVYGESYHHYRIVQEYLSESYVNGMSCIERDVTAMR 56
Score = 68.9 bits (161), Expect = 9e-11
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +3
Query: 156 RLKIGSCTFDEAVKMIDAGDSIKSLSHWFSTGE 254
RLK GSCTFDEAVKMIDAGDSIKSLSHWFST E
Sbjct: 57 RLKSGSCTFDEAVKMIDAGDSIKSLSHWFSTSE 89
>UniRef50_Q65359 Cluster: Uncharacterized 37.2 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Uncharacterized 37.2 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 331
Score = 65.7 bits (153), Expect = 9e-10
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +2
Query: 257 TGIDDNVRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMR 436
TG+ ++++ L ID P++ RV IF+L+ +I D+ LQ I+GRF HF R
Sbjct: 91 TGLCADMQRALADIDRHAPLARRVGRRANIFALDAIA-DIPSDVTNNLQGIIGRFMHFPR 149
Query: 437 NGKLLHIANVFNPNSDAVGWWYNKF 511
L +A+VF+P+ A GWWY+KF
Sbjct: 150 CSGLARVADVFDPDIRADGWWYHKF 174
Score = 64.9 bits (151), Expect = 1e-09
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 10 IIYNYYAKYNEVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMR 156
++Y YY YN HD YGESYH +RIV E+L+ +YV++ SC+ RD+ R
Sbjct: 8 LVYAYYGSYNLPHDRYGESYHLYRIVHEHLTNTYVSNASCVRRDIATAR 56
>UniRef50_Q65360 Cluster: ORF 1173; n=1; Orgyia pseudotsugata single
capsid nuclopolyhedrovirus|Rep: ORF 1173 - Orgyia
pseudotsugata single capsid nuclear polyhedrosis
virus(OpSNPV)
Length = 388
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = -1
Query: 511 KFIVPPSDSVAIRVEHVGDVQQFSVSHEMFKAAQNNLQAAQHVLRNFSFKIVQREYLPSG 332
KF+VPP+ +R++HVGD +Q + + ++ + A + LQ +V RN ++ +++ PS
Sbjct: 218 KFVVPPTVGSDVRIKHVGDPRQAAAARKVHEPANDALQVVCYVARNVGDRVQRKDVGPS- 276
Query: 331 LNAHADGNHRV 299
A+A G RV
Sbjct: 277 --ANAPGKRRV 285
>UniRef50_Q4S102 Cluster: Chromosome 5 SCAF14773, whole genome
shotgun sequence; n=9; Euteleostomi|Rep: Chromosome 5
SCAF14773, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1043
Score = 37.1 bits (82), Expect = 0.34
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Frame = +2
Query: 218 HQKPFPLVQHR--RTTGIDDNVRKVLE-QIDAVVPVSVRVQTGRQIFSLNN 361
HQ+ P+VQ++ R+ G+D+++ K LE DAVV ++V+ + RQI SL+N
Sbjct: 794 HQQLPPIVQNQEARSLGMDESLFKRLELHRDAVVQLNVQYRMNRQIMSLSN 844
>UniRef50_A7HGZ8 Cluster: Heat shock protein DnaJ domain protein;
n=2; Anaeromyxobacter|Rep: Heat shock protein DnaJ
domain protein - Anaeromyxobacter sp. Fw109-5
Length = 560
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 251 AGAEPMGKAFDGIARVYHLDRFVKGATADL 162
AG E + +AF +AR +H DRFV TADL
Sbjct: 368 AGREEVKRAFLALARQFHPDRFVSPETADL 397
>UniRef50_A3TQX4 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 308
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -1
Query: 412 QNNLQAAQHVLRNFSFKIVQREYLPSGLNAHA---DGNHRVDL 293
+N LQAA ++L ++F +VQ Y P G+ A A DG VD+
Sbjct: 171 KNMLQAADNLLPRWNFSLVQGSYNPGGVGASAGTHDGGGVVDI 213
>UniRef50_Q4PGQ1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1614
Score = 33.1 bits (72), Expect = 5.6
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -1
Query: 271 IVDARRSPVLNQWERLLMESPASIILTASSKVQLPIFKRA*RSRPALCTTYRLRTIL 101
+V R+ V N LL E+ AS+ L +K+Q I + +R LC +RLRTIL
Sbjct: 1504 LVSLARALVKNSKIILLDEATASVDLETDAKIQQTI-REEFANRTILCIAHRLRTIL 1559
>UniRef50_Q7CRF1 Cluster: AGR_L_3540p; n=2; Agrobacterium
tumefaciens str. C58|Rep: AGR_L_3540p - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 783
Score = 32.7 bits (71), Expect = 7.4
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 57 WRVVSPSPYSSGIPIRIVRKRYVVHRAGRDRYARLKIGSCTFDEAVKMIDAGDSIKSLSH 236
WR + P P+ +G P + ++ A RDR A L++GS + A + AG+S+ +++
Sbjct: 191 WRELLP-PFLTGCPEQHPTLFRLLTLAARDRLATLQVGSAVVEVASALERAGNSLAAMAM 249
Query: 237 WFSTG 251
G
Sbjct: 250 LLDRG 254
>UniRef50_Q4UGX2 Cluster: Possible ribonuclease ii family protein;
n=2; Theileria|Rep: Possible ribonuclease ii family
protein - Theileria annulata
Length = 1062
Score = 32.7 bits (71), Expect = 7.4
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 192 VKMIDAGDSIKSLSHWFSTGERRASTITSVKCWSKSTRWFPSACAFKPDGRYSL*TILN 368
+K+++ ++ SL F+ E +T+ V+C + TRW P+ +K D + T+LN
Sbjct: 253 IKVLNRTPNLSSLVSTFNLSEFFDNTLEYVRCQPRDTRW-PAFKVYKSDLESDVTTVLN 310
>UniRef50_Q2YAA0 Cluster: NADH-quinone oxidoreductase; n=2;
Bacteria|Rep: NADH-quinone oxidoreductase - Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849)
Length = 942
Score = 32.3 bits (70), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 393 AACKLFWAALNIS*ETENCCTSPTCSTLIATLSDGGTI 506
AA + WA N+ E C P C++L AT+ GG++
Sbjct: 514 AAANVTWALCNLGRPAELCYVVPECNSLGATMLGGGSL 551
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,705,903
Number of Sequences: 1657284
Number of extensions: 12348885
Number of successful extensions: 36693
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36678
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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