Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060176.seq
(686 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 26 0.33
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 26 0.33
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 24 1.0
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 24 1.0
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 23 3.1
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 22 4.1
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 5.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.5
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 9.5
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 9.5
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 9.5
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 9.5
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 570 WKWMLSLGWLVYGIGDLMI 514
+KW+ L W YG G LMI
Sbjct: 585 FKWLSFLSWFRYGNGALMI 603
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 570 WKWMLSLGWLVYGIGDLMI 514
+KW+ L W YG G LMI
Sbjct: 585 FKWLSFLSWFRYGNGALMI 603
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 248 SIWFRCQ*DRSTGVEKG*SNVEETVPG 168
++W CQ + GVE+G +PG
Sbjct: 147 TVWSHCQCVLADGVERGILTANRMIPG 173
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 248 SIWFRCQ*DRSTGVEKG*SNVEETVPG 168
++W CQ + GVE+G +PG
Sbjct: 147 TVWSHCQCVLADGVERGILTANRMIPG 173
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 489 PCDLGYITRSSNPRFHTPTTPDLTSISINPLTP 587
P G + RSS+P+ PT P + ++ P
Sbjct: 82 PFAWGSLXRSSSPQTSAPTGPPIVRCALRKHKP 114
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 492 CDLGYITRSSNPRFHTPTTPDL 557
CDL T+SSN P TP L
Sbjct: 172 CDLCQKTKSSNRPHQGPLTPIL 193
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 11 IPSLVNAFSSSKPPQTDNPSAR 76
+P + N S PP T+N A+
Sbjct: 214 LPIIHNLLSDKNPPNTENNCAQ 235
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 490 PAISAT*PDHQIPDSIHQP 546
PAI P ++PD H+P
Sbjct: 247 PAIVTPGPKQELPDLNHKP 265
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 490 PAISAT*PDHQIPDSIHQP 546
PAI P ++PD H+P
Sbjct: 139 PAIVTPGPKQELPDLNHKP 157
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 552 DLTSISINPLTPVLEGVRGRG*SLRCHQRVPSAVS*PP 665
D TS++ + L+P G+ RG S+ VP A+ P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 552 DLTSISINPLTPVLEGVRGRG*SLRCHQRVPSAVS*PP 665
D TS++ + L+P G+ RG S+ VP A+ P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 552 DLTSISINPLTPVLEGVRGRG*SLRCHQRVPSAVS*PP 665
D TS++ + L+P G+ RG S+ VP A+ P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 552 DLTSISINPLTPVLEGVRGRG*SLRCHQRVPSAVS*PP 665
D TS++ + L+P G+ RG S+ VP A+ P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,862
Number of Sequences: 336
Number of extensions: 3185
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -