Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060175.seq
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin re...    28   7.2  
AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin re...    28   7.2  
AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin re...    28   7.2  
U41551-3|AAY86279.1|  126|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical
           protein F40G12.15 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 524 FSSSLTTNDTFPIASKNIMVMTTSLILYSV 435
           F       D FPI   N++V+TT+  LY+V
Sbjct: 191 FEGRAVEYDNFPILFNNMLVVTTTCFLYTV 220


>U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical
           protein C13B9.4c protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 452 KSQNELRRGSRSVASHYAAKNGTANA 477


>U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical
           protein C13B9.4b protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 442 KSQNELRRGSRSVASHYAAKNGTANA 467


>U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical
           protein C13B9.4a protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 452 KSQNELRRGSRSVASHYAAKNGTANA 477


>AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1C protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 452 KSQNELRRGSRSVASHYAAKNGTANA 477


>AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1B protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 452 KSQNELRRGSRSVASHYAAKNGTANA 477


>AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1A protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 191 KSQNTILNNNAAIASQYAAGNGASSS 268
           KSQN +   + ++AS YAA NG +++
Sbjct: 442 KSQNELRRGSRSVASHYAAKNGTANA 467


>U41551-3|AAY86279.1|  126|Caenorhabditis elegans Hypothetical
           protein T06F4.3 protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +2

Query: 116 LLCDEHQNVQLNTDVLINFIMHVARKSQNTILNNNAAIASQYAAGNGASSSQRQVPPILR 295
           L  DEH    LN++     I+ VA  +     N  + I S+ + G GA     ++P ++R
Sbjct: 11  LFYDEHH---LNSEKAQKEIVPVADYTPQAFENEKSPIDSEESGGGGAPPDSLEIPDLVR 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,330,611
Number of Sequences: 27780
Number of extensions: 268986
Number of successful extensions: 835
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)