Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060174.seq
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 158 4e-39
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 158 4e-39
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 157 1e-38
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 155 2e-38
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 155 2e-38
03_01_0034 + 318432-318825,318902-319851 153 9e-38
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 144 4e-35
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 138 4e-33
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 80 1e-15
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 79 3e-15
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 78 7e-15
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 76 2e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 64 7e-11
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 33 0.27
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 32 0.35
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 31 0.62
10_01_0300 - 3257584-3258825 31 0.82
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 30 1.4
08_02_0235 + 14627648-14628889 30 1.4
08_01_0749 + 7063297-7064370 30 1.4
07_01_1086 - 9930311-9931993 30 1.4
05_03_0216 + 10370531-10371922,10378656-10378808 30 1.4
04_01_0187 - 2153546-2154520,2154581-2155858 30 1.4
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 29 3.3
10_04_0010 - 7487455-7489490,7489569-7489980 29 3.3
04_04_0144 - 23095172-23095830,23095915-23097265 29 3.3
03_02_1029 - 13488535-13493037 29 3.3
12_01_0406 - 3212007-3212757,3212856-3212988,3215840-3215927,321... 28 5.8
02_02_0653 - 12655787-12656311 28 5.8
09_04_0325 + 16689613-16689772,16690043-16690329 28 7.6
05_03_0458 + 14280953-14281866,14281964-14282912 28 7.6
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 28 7.6
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 158 bits (383), Expect = 4e-39
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 116 bits (279), Expect = 2e-26
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE+I DEHG+ TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 158 bits (383), Expect = 4e-39
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 115 bits (276), Expect = 4e-26
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE+I DEHGI TG Y GDSDLQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 157 bits (380), Expect = 1e-38
Identities = 76/121 (62%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGP+GQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 116 bits (280), Expect = 1e-26
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE+I DEHGI TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 155 bits (377), Expect = 2e-38
Identities = 75/121 (61%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVR+GP+GQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 243 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 302
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 303 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 362
Query: 616 F 618
+
Sbjct: 363 Y 363
Score = 111 bits (268), Expect = 4e-25
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = +2
Query: 68 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKY 247
KMREI+HIQ GQCGNQIG+KFWE++ DEHGI PTG Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 248 V 250
V
Sbjct: 240 V 240
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 155 bits (377), Expect = 2e-38
Identities = 75/121 (61%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVR+GP+GQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 109 bits (262), Expect = 2e-24
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIG+KFWE++ DEHGI PTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 153 bits (372), Expect = 9e-38
Identities = 74/121 (61%), Positives = 83/121 (68%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGP+G I RPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+CDCLQGFQ+ H K + + PKVS TVV P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 107 bits (258), Expect = 6e-24
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE++ EHGI TG Y GDSDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 144 bits (350), Expect = 4e-35
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVR+GP+GQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQG 465
EAE+CDCLQG
Sbjct: 123 EAENCDCLQG 132
Score = 111 bits (268), Expect = 4e-25
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE++ DEHGI PTG Y G+SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXVXPSP 587
GTLLISKIREEYPDR+M T+ V PSP
Sbjct: 169 GTLLISKIREEYPDRMMLTFSVFPSP 194
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 138 bits (334), Expect = 4e-33
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDS+RSGP G I RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 EAESCDCLQ 462
EAE+CDCLQ
Sbjct: 123 EAENCDCLQ 131
Score = 105 bits (252), Expect = 3e-23
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREI+HIQ GQCGNQIGAKFWE+I EHG+ PTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXVXPSP 587
GTLLISKIREEYPDR+M T+ V PSP
Sbjct: 164 GTLLISKIREEYPDRMMLTFSVFPSP 189
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AI DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E+VD LD VRK
Sbjct: 65 AIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 436 EAESCDCLQGF 468
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQL--ERINVYYNEASGGK 244
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E+VD LD +RK
Sbjct: 65 AVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 EAESCDCLQGF 468
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E+VD LD +RK
Sbjct: 65 AVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 EAESCDCLQGF 468
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D V++GP+ Q+ P+ + + A NN+A+GHYT G E+VD LD +RK
Sbjct: 125 ALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRK 184
Query: 436 EAESCDCLQGF 468
A++C LQGF
Sbjct: 185 LADNCTGLQGF 195
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDS 190
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 429
A+L DLEP ++ +++ + + +N + GAGNNWA G Y +G ++VD ++D++
Sbjct: 64 ALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMI 122
Query: 430 RKEAESCDCLQGFQLTH 480
+EA+ D L+GF L H
Sbjct: 123 DREADGSDSLEGFVLCH 139
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYI 61
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q +KFW+ + +E G + + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q +KFW+ + +E G + + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 262 GWRGHVLAAGGFIVVYIDALQLQVRVPMVSTGGVDAVLVGDDL 134
G RG +A G IVV L + V GV AVLVG+ L
Sbjct: 327 GERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>08_02_0235 + 14627648-14628889
Length = 413
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q +KFW+ + E G + + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>04_04_0144 - 23095172-23095830,23095915-23097265
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 286 WCRAPSXRGWRGHVLAAGGFIVVYIDALQLQVRVPMVSTGGVDAVLV 146
W + W G V + G + V++ + L+ VP+ + GG+D + V
Sbjct: 46 WNTSQPTCSWTGVVCSGGRVVEVHLPGVGLRGNVPVGALGGLDKLAV 92
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 107 GNQIGAKFWEIISDEHG--IXPTGAYHGDSDLQLERIN 214
G+Q + FW+ + +E G + + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>12_01_0406 -
3212007-3212757,3212856-3212988,3215840-3215927,
3216124-3216489
Length = 445
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 326 RKICPKGPERTESMVPGSKSXRMAGARTCRRRLHCSIH 213
RK+ PK P T S+ S + G R RR++C +H
Sbjct: 231 RKVSPKNPSSTYSIAQVSYELNVLGTRG-PRRMNCVMH 267
>02_02_0653 - 12655787-12656311
Length = 174
Score = 28.3 bits (60), Expect = 5.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 427 RRLKLNRRAQHPPCSVPW 374
R + ++ QHPPC++PW
Sbjct: 10 RSIAQQQQQQHPPCNLPW 27
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/17 (76%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +1
Query: 328 PDNFVFGQSGAGN-NWA 375
PDNFVF QS AG NWA
Sbjct: 131 PDNFVFHQSVAGGINWA 147
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 416 TESTSSAPSV*CPLAQLLPA-PDCPKTKLSGRKICPKGPERTESMVPGSKSXRMAGARTC 240
T S SS+PS PL L P P P T LS P + + P + S
Sbjct: 55 TSSPSSSPSSPPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRS 114
Query: 239 RRRLHCSIH*CAPTASQSP 183
CS APT++Q+P
Sbjct: 115 ASSSKCS----APTSAQTP 129
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -1
Query: 377 LAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSXRMAGARTCRRRLH 225
L QL P+P CP + I P G + M S+ R R R H
Sbjct: 442 LPQLCPSPTCPSLAKKQKSIHPDGKRVAKVMFASSEITSDPEVRQGRARKH 492
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,811,587
Number of Sequences: 37544
Number of extensions: 319180
Number of successful extensions: 1017
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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