Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060174.seq
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 164 7e-41
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 163 9e-41
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 162 3e-40
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 161 6e-40
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 9e-30
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 126 2e-29
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 84 8e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 84 8e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 83 1e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 81 6e-16
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 8e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 1e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 4e-11
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 52 6e-07
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 6e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.007
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 37 0.017
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 32 0.36
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 5.9
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 164 bits (398), Expect = 7e-41
Identities = 82/121 (67%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AIL DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAESCDCLQGFQLTH K + + PKVS TVV P
Sbjct: 123 EAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 127 bits (306), Expect = 9e-30
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 163 bits (397), Expect = 9e-41
Identities = 81/121 (66%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK
Sbjct: 276 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 335
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAESCDCLQGFQLTH K + + PKVS TVV P
Sbjct: 336 EAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 395
Query: 616 F 618
+
Sbjct: 396 Y 396
Score = 132 bits (319), Expect = 2e-31
Identities = 59/69 (85%), Positives = 62/69 (89%)
Frame = +2
Query: 44 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYY 223
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 224 NEASGGKYV 250
NEA+GGKYV
Sbjct: 265 NEATGGKYV 273
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 162 bits (393), Expect = 3e-40
Identities = 80/121 (66%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK
Sbjct: 8 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 67
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAESCDC+QGFQLTH K + + PKVS TVV P
Sbjct: 68 EAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEP 127
Query: 616 F 618
+
Sbjct: 128 Y 128
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 161 bits (390), Expect = 6e-40
Identities = 78/121 (64%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
++L DLEPGTMDSVRSGPFGQI RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 SVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAESCDC+QGFQLTH K + + PKVS TVV P
Sbjct: 123 EAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 124 bits (300), Expect = 5e-29
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIV +QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 127 bits (306), Expect = 9e-30
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVF 345
AIL DLEPGTMDSVRSGPFGQI RPDNFVF
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 126 bits (303), Expect = 2e-29
Identities = 53/73 (72%), Positives = 63/73 (86%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+IL DLEPGTMD+VR GP G + RPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RK
Sbjct: 19 SILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRK 78
Query: 436 EAESCDCLQGFQL 474
EAE+CDC+QG QL
Sbjct: 79 EAENCDCMQGVQL 91
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXVXPSP 587
GTL++SKIREEYPDRI++ + V PSP
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSP 129
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ V G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRK 124
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 125 LADQCTGLQGFLIFH 139
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 498 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRK 557
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 558 LADQCTGLQGFLIFH 572
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 248 V 250
V
Sbjct: 495 V 495
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 84.2 bits (199), Expect = 8e-17
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 650 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 709
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 710 LADQCTGLQGFLIFH 724
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 129 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 188
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 189 LADQCTGLQGFLIFH 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 245 YV 250
+V
Sbjct: 646 HV 647
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 248 V 250
V
Sbjct: 574 V 574
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 248 V 250
V
Sbjct: 126 V 126
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E++D+VLD +RK
Sbjct: 65 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRK 124
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 125 LADGCTGLQGFLIFH 139
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 123
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 124 LADQCTGLQGFLIFH 138
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 248 V 250
V
Sbjct: 61 V 61
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 869 AVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRK 928
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 929 LADQCTGLQGFLIFH 943
Score = 81.0 bits (191), Expect = 8e-16
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E +D VLD +RK
Sbjct: 436 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRK 495
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 496 LADGCTGLQGFLIFH 510
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 248 V 250
V
Sbjct: 433 V 433
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 248 V 250
V
Sbjct: 866 V 866
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D +R+G + Q+ P+ + G+ A NN+A+GHYT G + +D+VLD +RK
Sbjct: 483 AVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRK 542
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 543 LADQCSGLQGFLVFH 557
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G +L++ VLD +RK
Sbjct: 50 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 110 LADQCTGLQGFLIFH 124
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 248 V 250
V
Sbjct: 480 V 480
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 116 IGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKYV 250
+G WE+ EHGI P G D + + N +++E GK+V
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 47
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D VR+G + Q+ P+ + G+ A NN+A+GHYT G E++D VLD RK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRK 124
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 125 LADQCTGLQGFLIFH 139
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/75 (44%), Positives = 49/75 (65%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEP +D VR+G + + P+ + G+ A NN+A+GHYT G E+V+ V+D +RK
Sbjct: 976 AVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRK 1035
Query: 436 EAESCDCLQGFQLTH 480
+ C LQGF + H
Sbjct: 1036 MTDQCSGLQGFLIFH 1050
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+ DLEP +D +R+G + Q+ P+ + G+ A NN+A+GHYT G E +D LD +RK
Sbjct: 30 AVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 89
Query: 436 EAESCDCLQGFQLTH 480
A+ C LQGF + H
Sbjct: 90 LADQCTGLQGFLIFH 104
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +1
Query: 289 DSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 468
D VR+G + Q+ P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 469 QLTH 480
+ H
Sbjct: 73 LIFH 76
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1
Query: 295 VRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 474
VR+G + Q+ P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 475 TH 480
H
Sbjct: 63 FH 64
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 349 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 480
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXVXPSP 587
G+LL+SKIREEYPDR+++++ V PSP
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSP 81
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +1
Query: 295 VRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 474
+R+G + Q+ P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 475 TH 480
H
Sbjct: 63 FH 64
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 328 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 480
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF + H
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFH 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 295 VRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
VR+G + Q+ P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 244 VRAPAILXDLEPGTMDSVRS--GPFGQIXRPDNFVFGQS-GAGNNWAKGHYTEGAELVDS 414
+ A A+ D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 64 LNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDK 123
Query: 415 VLDVVRKEAESCDCLQGF 468
VLD+V++E E CD L GF
Sbjct: 124 VLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKFWEIISDE 151
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQ--LERINVYYNEASGGK 244
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 295 VRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
VR G + + PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLER----INVYYNEASG 238
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 239 GKY 247
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 128 FWEIISDEHGIXPTGAYHG-DSDLQLERINVYYNE 229
FWE+I++EHGI P G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 304 GPFGQIXRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQGF 468
G GQ R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 59 GVHGQ-NRDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGT 117
Query: 469 QLTH 480
+ H
Sbjct: 118 IVMH 121
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 238 RQVRAPAILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNW 372
+ ++A A+L D+E G ++++ GP + + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXVXPSP 587
GTL++ ++EEYPDRI+++ V PSP
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSP 54
Score = 34.3 bits (75), Expect = 0.090
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 427 VRKEAESCDCLQGFQLTH 480
+RKEAE CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 465 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVTGAGLSEDEVVRTXDLSERSRADRVH 286
S++A R R +S V I +L V++L PV+ G +++D V RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 285 GAGL 274
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 446 DSASFRTTSKTESTSSAPSV*CPLAQL 366
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 383 CPLAQLLPAPDCPKTKLSGRKICP 312
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 383 CPLAQLLPAPDCPKTKLSGRKICP 312
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 383 CPLAQLLPAPDCPKTKLSGRKICP 312
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 359 APDCPKTKLSGRKICPKGPERTESMVPGSKS 267
A DCP ++ +GR +CP P +S + +K+
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKA 168
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 226 IVVYIDALQLQVRVPM-VSTGGVDAVLVGDDLPEL 125
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,156,689
Number of Sequences: 59808
Number of extensions: 321125
Number of successful extensions: 819
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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