Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060174.seq
(662 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 74 4e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 74 4e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 74 4e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 74 4e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.70
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 26 0.92
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 26 0.92
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 26 0.92
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 6.5
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 8.6
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 8.6
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 4e-15
Identities = 39/79 (49%), Positives = 44/79 (55%)
Frame = +1
Query: 382 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE** 561
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH K +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 562 THXQLXHXPKVSGTVVXPF 618
+ PKVS TVV P+
Sbjct: 61 NTYSVVPSPKVSDTVVEPY 79
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 4e-15
Identities = 39/79 (49%), Positives = 44/79 (55%)
Frame = +1
Query: 382 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE** 561
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH K +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 562 THXQLXHXPKVSGTVVXPF 618
+ PKVS TVV P+
Sbjct: 61 NTYSVVPSPKVSDTVVEPY 79
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 4e-15
Identities = 39/79 (49%), Positives = 44/79 (55%)
Frame = +1
Query: 382 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE** 561
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH K +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 562 THXQLXHXPKVSGTVVXPF 618
+ PKVS TVV P+
Sbjct: 61 NTYSVVPSPKVSDTVVEPY 79
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 74.1 bits (174), Expect = 4e-15
Identities = 39/79 (49%), Positives = 44/79 (55%)
Frame = +1
Query: 382 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE** 561
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTH K +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 562 THXQLXHXPKVSGTVVXPF 618
+ PKVS TVV P+
Sbjct: 61 NTYSVVPSPKVSDTVVEPY 79
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.70
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWE 136
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 SMYTTMKPPAASTCPRHPRXLGARHH 287
S+YTT+ P+AST RH +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 SMYTTMKPPAASTCPRHPRXLGARHH 287
S+YTT+ P+AST RH +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 SMYTTMKPPAASTCPRHPRXLGARHH 287
S+YTT+ P+AST RH +RHH
Sbjct: 13 SLYTTVSEPSASTKHRH----HSRHH 34
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 343 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 429
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 8.6
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 419 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 306
K T + + CPL ++ DC +L KI KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 8.6
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 419 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 306
K T + + CPL ++ DC +L KI KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,247
Number of Sequences: 2352
Number of extensions: 10935
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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