Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060174.seq
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 161 5e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 160 7e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 160 7e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 157 5e-39
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 156 1e-38
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 156 1e-38
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 101 6e-22
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 101 6e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 81 5e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 81 5e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 81 5e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 81 5e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 79 2e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 79 2e-15
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 4e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 4e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 4e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 4e-15
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 78 5e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 78 6e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 71 7e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 60 2e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 60 2e-09
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 161 bits (390), Expect = 5e-40
Identities = 78/121 (64%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQ+ RPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE CDCLQGFQLTH K + + + PKVS TVV P
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 121 bits (291), Expect = 5e-28
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 77/121 (63%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQ+ RPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE CDCLQGFQLTH K + + + PKVS TVV P
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 113 bits (273), Expect = 8e-26
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 160 bits (389), Expect = 7e-40
Identities = 77/121 (63%), Positives = 85/121 (70%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQ+ RPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE CDCLQGFQLTH K + + + PKVS TVV P
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 112 bits (270), Expect = 2e-25
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 157 bits (382), Expect = 5e-39
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A L DLEPGTMDSVR+GPFGQ+ RPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAESCDCLQGFQ+TH K + + PKVS TVV P
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 129 bits (311), Expect = 2e-30
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIGAKFWE+ISDEHGI PTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 156 bits (379), Expect = 1e-38
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQ+ RPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAES DCLQGFQLTH K + + PKVS TVV P
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 116 bits (279), Expect = 1e-26
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIG+KFWE+ISDEHGI P+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 156 bits (379), Expect = 1e-38
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A+L DLEPGTMDSVRSGPFGQ+ RPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAES DCLQGFQLTH K + + PKVS TVV P
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 116 bits (279), Expect = 1e-26
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIG+KFWE+ISDEHGI P+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (241), Expect = 6e-22
Identities = 50/121 (41%), Positives = 73/121 (60%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AIL DL+P +++ VRS +G++ P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+ D L+GFQL H K + + + + KVS TVV P
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (241), Expect = 6e-22
Identities = 50/121 (41%), Positives = 73/121 (60%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AIL DL+P +++ VRS +G++ P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 436 EAESCDCLQGFQLTHXXXXXXXXXXXXXXXPKSEKSTLTE**THXQLXHXPKVSGTVVXP 615
EAE+ D L+GFQL H K + + + + KVS TVV P
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 616 F 618
+
Sbjct: 183 Y 183
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AI DLEP +D +R+G +G + PD + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Query: 436 EAESCDCLQGFQLTH 480
+ E+C+ LQGF + H
Sbjct: 128 QTENCEGLQGFLVFH 142
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTG-AYHGDSDLQLERINVYYNEASGGKYV 250
RE V I GQ G QIG WE+ EHG+ G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AI DLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G EL+D V+D VR+
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
Query: 436 EAESCDCLQGFQLTH 480
E C LQGF + H
Sbjct: 125 LTERCQSLQGFLIFH 139
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLE--RINVYYNEASGGK 244
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 81.4 bits (192), Expect = 5e-16
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 81.4 bits (192), Expect = 5e-16
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 81.4 bits (192), Expect = 5e-16
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 81.4 bits (192), Expect = 5e-16
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 123 LADNCSGLQGFFVFH 137
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A++ DLEP +D +R+G + + P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 125 LADNCTGLQGFLVFH 139
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A++ DLEP +D +R+G + + P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 124 LADNCTGLQGFLVFH 138
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 248 V 250
V
Sbjct: 61 V 61
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A++ DLEP +D +R+G + + P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 125 LADNCTGLQGFLVFH 139
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
A++ DLEP +D +R+G + + P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 436 EAESCDCLQGFQLTH 480
A++C LQGF + H
Sbjct: 125 LADNCTGLQGFLVFH 139
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YV 250
+V
Sbjct: 61 HV 62
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 78.2 bits (184), Expect = 5e-15
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
+I DLEP +D +R+G + ++ P+ + G+ A NN+A+GHYT G E++D+ LD +R+
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Query: 436 EAESCDCLQGFQLTH 480
A +C+ LQGF + H
Sbjct: 122 LANNCEGLQGFFVFH 136
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 435
AI+ DLEP +D +R+G + + P+ + G+ A NN+A+GHYT G E++D V+D VR+
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
Query: 436 EAESCDCLQGFQLTH 480
E+C LQGF + H
Sbjct: 130 LVENCRGLQGFLVFH 144
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 65 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQL--ERINVYYNEASG 238
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 239 GKYV 250
GK+V
Sbjct: 64 GKHV 67
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = +1
Query: 259 ILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 438
+ DLEP +D VR+G + + P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 72 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131
Query: 439 AESCDCLQGFQLTH 480
AE+C+ LQGF + H
Sbjct: 132 AENCNGLQGFVIFH 145
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDL---QLERINVYYNEASGGK 244
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 245 YV 250
+V
Sbjct: 67 HV 68
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = +1
Query: 259 ILXDLEPGTMDSVRSGPFGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 438
+ DLEP +D VR+G + + P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 44 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 103
Query: 439 AESCDCLQGFQLTH 480
AE+C+ LQGF + H
Sbjct: 104 AENCNGLQGFVIFH 117
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGP-FGQIXRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 426
A+L DLEP ++ + P F + DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 427 VRKEAESCDCLQGFQLTH 480
+ +EAE+ + L G TH
Sbjct: 124 IIREAENTNNLDGILFTH 141
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
++ + GQCGNQ+ FW+ + DEHGI G + D+ ++ ++Y +A YV
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYV 62
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXV 575
G+LL+ ++RE +P +++ TY V
Sbjct: 152 GSLLLERLREAFPKKVIQTYSV 173
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 256 AILXDLEPGTMDSVRSGP-FGQIXRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 426
A+L DLEP ++ + P F + DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 427 VRKEAESCDCLQGFQLTH 480
+ +EAE+ + L G TH
Sbjct: 124 IIREAENTNNLDGILFTH 141
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKFWEIISDEHGIXPTGAYHGDSDLQLERINVYYNEASGGKYV 250
++ + GQCGNQ+ FW+ + DEHGI G + D+ ++ ++Y +A YV
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYV 62
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 510 GTLLISKIREEYPDRIMNTYXV 575
G+LL+ ++RE +P +++ TY V
Sbjct: 152 GSLLLERLREAFPKKVIQTYSV 173
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 452 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCP 345
S A R + + S SS+PS CP LLP P CP
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLP-PVCP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,497,242
Number of Sequences: 27780
Number of extensions: 229340
Number of successful extensions: 683
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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