Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060173.seq
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1; ...    36   0.69 
UniRef50_A3Y877 Cluster: Methyltransferase; n=1; Marinomonas sp....    34   3.7  
UniRef50_Q7SYE3 Cluster: LOC402835 protein; n=6; Clupeocephala|R...    33   4.8  
UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA...    33   6.4  
UniRef50_UPI000065EE9A Cluster: Homolog of Brachydanio rerio "Ki...    33   6.4  
UniRef50_Q4HRA0 Cluster: Glycosyl transferase family 8 family; n...    33   6.4  
UniRef50_A2CBA7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_A7S264 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.4  

>UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 437

 Score = 36.3 bits (80), Expect = 0.69
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 348 CEVCGIKERHL---TEKRFFARFPLDVNRCKQWVKMVGKEDL 464
           C V G + R L   T  R + RFP D   CKQWV+   + +L
Sbjct: 9   CLVMGCRNRQLLNQTNTRSYFRFPRDAEMCKQWVEFCNRPEL 50


>UniRef50_A3Y877 Cluster: Methyltransferase; n=1; Marinomonas sp.
           MED121|Rep: Methyltransferase - Marinomonas sp. MED121
          Length = 446

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -1

Query: 422 IDIQRKPCEKPFFSKMSFFDTTNFT-STMSIRHVKKFAKGAKNLNNTGVSFSTTITYIYK 246
           I++  + C+K  F  + F+   NF    +++RH+   +KG K     G     T+ +IYK
Sbjct: 161 INLAEQECDKISFGSLPFYLRANFACQRLAMRHLGFMSKGMKIGLKYGFDSGVTLDHIYK 220

Query: 245 QKQD 234
            + +
Sbjct: 221 NQPE 224


>UniRef50_Q7SYE3 Cluster: LOC402835 protein; n=6; Clupeocephala|Rep:
           LOC402835 protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 721

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +3

Query: 327 MPDTHRTCEVCGIKERHLTEKRFFARFPLDVNRCKQWVKMVGKEDLAYLQVHMLH 491
           MPD    C     K+        F  FPLD +RC+QWV    + DL       LH
Sbjct: 1   MPDC---CAAANCKQSTDQSSVSFFEFPLDPDRCRQWVGRCNRPDLQTKTPEDLH 52


>UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA20163-PA - Nasonia vitripennis
          Length = 843

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 384 EKRFFARFPLDVNRCKQWVKMVGKED-LAYLQVHMLHDLKHVWKHISQDETLQNQRS 551
           +KR F RFP D  R KQWV    + D L    + + +  +   KH +    L + R+
Sbjct: 21  DKRSFFRFPKDPQRSKQWVVACDRNDLLEKTPIELFNSYRVCAKHFTDTMFLNDLRN 77


>UniRef50_UPI000065EE9A Cluster: Homolog of Brachydanio rerio "Kif11
           protein.; n=1; Takifugu rubripes|Rep: Homolog of
           Brachydanio rerio "Kif11 protein. - Takifugu rubripes
          Length = 510

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +3

Query: 426 CKQWVKMVGKEDLAYLQVHMLHDLKHVWKHISQDETLQNQRSA*KNE-LSQTELDTATIE 602
           CK  V+ VG+E   + QV + H +  V  H+SQD++L +Q+   +NE L Q +L+   ++
Sbjct: 325 CKDQVRAVGREMSGH-QVVVKHAVAAVQDHLSQDQSLMDQQ---RNELLLQVQLNRQLVQ 380


>UniRef50_Q4HRA0 Cluster: Glycosyl transferase family 8 family; n=2;
           Campylobacter|Rep: Glycosyl transferase family 8 family
           - Campylobacter upsaliensis RM3195
          Length = 525

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = -3

Query: 645 GLRVELQKLKKNFISQWWQCQVQFGTARFFKRFFDFVKSRLEKCASKHVLNHVAYVLEDK 466
           GL  +L+ +K  +  +WW   ++     FF+  F  +K +LEK A  H    +A  L+DK
Sbjct: 301 GLDNDLKPIKVPYYKEWWDMALK---TPFFEEDFANLKDKLEKEALDHYAVALAKRLKDK 357

Query: 465 PDLL 454
            + L
Sbjct: 358 ENWL 361


>UniRef50_A2CBA7 Cluster: Putative uncharacterized protein; n=1;
           Prochlorococcus marinus str. MIT 9303|Rep: Putative
           uncharacterized protein - Prochlorococcus marinus
           (strain MIT 9303)
          Length = 573

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 472 FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSC--PKLNLT 588
           +KY+ Y+     G T  +T LY +KE LK  SC  PK+N T
Sbjct: 266 WKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDLPKVNRT 306


>UniRef50_A7S264 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 74

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 207 C*EIYSSCLVLFLFVNVSYCC*ETDSCVV*IFCAFCKLFNMPDTHRTC 350
           C  +Y+ C V+    +V +CC     C V +F   C++   P   R C
Sbjct: 27  CGAVYTPCCVVLFTPHVVWCCAVYTPCCVVLFTPCCEVLFTPHVGRCC 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,027,652
Number of Sequences: 1657284
Number of extensions: 10829473
Number of successful extensions: 28647
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28635
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)