Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060173.seq
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   3.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.3  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 480 VLEDKPDLLCQPSLPIVYIY 421
           V E K +L CQP++P V  Y
Sbjct: 237 VNERKENLTCQPAVPYVPFY 256


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +3

Query: 378 LTEKRFFARFPLDVNRCKQWVKMVGKEDLAYLQVHMLHDLKH 503
           LT ++ F   P       +W+KMV  E      ++  H  +H
Sbjct: 252 LTHRKPF--HPASTQSLSRWIKMVLAESGVDTSIYTAHSTRH 291


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 669 NWPCGVTSGLRVELQKLKKNFISQWWQ 589
           N+P    S + V+ Q   KN  + +WQ
Sbjct: 426 NYPGITVSNIEVQSQGSSKNTFNTFWQ 452


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +3

Query: 153 HKMIL*RVFFVRVNFNICC*EIYSSCLVLFLFVNVSYC 266
           + +IL  + F+ +NF +   ++Y +  ++       YC
Sbjct: 211 NSLILDLLVFITINFVVLLGDLYVTLYIILTNNQAKYC 248


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 228 CLVLFLFVNVSYCC*ETDSCVV 293
           CLV++  V+VS      D+C +
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTI 303


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 228 CLVLFLFVNVSYCC*ETDSCVV 293
           CLV++  V+VS      D+C +
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTI 303


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 669 NWPCGVTSGLRVELQKLKKNFISQWWQ 589
           N+P    + + V+ +  K N +S +WQ
Sbjct: 426 NYPGVTVTNIEVQAKGGKPNVLSTFWQ 452


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 313 ANFLTCLILIVLVKFVVSKKDILLKNGFSQGF 408
           ANF+     + L   +V  K  ++K+ F+QG+
Sbjct: 66  ANFMLTFFNVSLRIILVFSKGKVIKSFFNQGY 97


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/57 (21%), Positives = 22/57 (38%)
 Frame = -3

Query: 657 GVTSGLRVELQKLKKNFISQWWQCQVQFGTARFFKRFFDFVKSRLEKCASKHVLNHV 487
           G TS    +L    +     W +       +    +FF+ +K +      KH+L +V
Sbjct: 41  GTTSHPTSKLVPPDERITYSWTEINAFANVSPSKTKFFNLIKRKDSPVQKKHILKNV 97


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +1

Query: 535 YKIKEALKKTSCPKLNLTLPPLRDEILLQFLQLD 636
           Y + + + +++ PK+ L L  +    L+  +QLD
Sbjct: 300 YSVNKLIFRSNDPKVTLELCGMISTYLIIMIQLD 333


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 116 YKRY*KIKMPFSFLNNSMCYSSKPNE 39
           YKR   +K   S L +   YS KP E
Sbjct: 129 YKRSNDLKTLLSNLESIQIYSIKPKE 154


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 116 YKRY*KIKMPFSFLNNSMCYSSKPNE 39
           YKR   +K   S L +   YS KP E
Sbjct: 85  YKRSNDLKTLLSNLESIQIYSIKPKE 110


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 552 RFFDFVKSRLEKCASKHVLNHV 487
           +FF+ +K +      KH+L +V
Sbjct: 76  KFFNLIKRKDSPVQKKHILKNV 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,221
Number of Sequences: 336
Number of extensions: 3049
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)