Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060173.seq
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.        30   8.7  
BC048252-1|AAH48252.1|  444|Homo sapiens GTF2IRD2B protein protein.    30   8.7  
BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,...    30   8.7  
AY312854-1|AAQ19674.1|  949|Homo sapiens general transcription f...    30   8.7  
AY312853-1|AAQ19673.1|  949|Homo sapiens general transcription f...    30   8.7  
AY312850-1|AAR36863.1|  949|Homo sapiens transcription factor GT...    30   8.7  
AY260739-1|AAP14955.1|  949|Homo sapiens GTF2IRD2 protein.             30   8.7  
AK095572-1|BAC04576.1|  702|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AK025076-1|BAB15060.1|  364|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 396 FARFPLDVNRCKQWVKMVGKED 461
           F RFPLD  R K+WV++V +++
Sbjct: 22  FHRFPLDPKRRKEWVRLVRRKN 43


>BC048252-1|AAH48252.1|  444|Homo sapiens GTF2IRD2B protein protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472 FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
           +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 396 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 431


>BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,
           apoptosis associated protein 2 protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 396 FARFPLDVNRCKQWVKMVGKED 461
           F RFPLD  R K+WV++V +++
Sbjct: 22  FHRFPLDPKRRKEWVRLVRRKN 43


>AY312854-1|AAQ19674.1|  949|Homo sapiens general transcription factor
            II i repeat domain 2 alpha protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472  FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
            +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 901  YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>AY312853-1|AAQ19673.1|  949|Homo sapiens general transcription factor
            II i repeat domain 2 protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472  FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
            +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 901  YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>AY312850-1|AAR36863.1|  949|Homo sapiens transcription factor
            GTF2IRD2 beta protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472  FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
            +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 901  YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>AY260739-1|AAP14955.1|  949|Homo sapiens GTF2IRD2 protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472  FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
            +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 901  YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>AK095572-1|BAC04576.1|  702|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38253 fis, clone FCBBF3000768, moderately
           similar to Homo sapiens general transcription factor 2-I
           (GTF2I) ).
          Length = 702

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472 FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
           +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 654 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 689


>AK025076-1|BAB15060.1|  364|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21423 fis, clone COL04129. ).
          Length = 364

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 472 FKYICYMI*NMFGSTFLKTRLYKIKEALKKTSCPKL 579
           +K+ C  I +MFGST++  +L+ I +  K   C +L
Sbjct: 316 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,116,713
Number of Sequences: 237096
Number of extensions: 1556837
Number of successful extensions: 3187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3187
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)