Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060173.seq
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001486-1|AAN71241.1|  797|Drosophila melanogaster LD23345p pro...    30   3.3  
AY070545-1|AAL48016.1|  666|Drosophila melanogaster LD26757p pro...    30   3.3  
AE013599-3823|AAM68306.1|  797|Drosophila melanogaster CG4057-PB...    30   3.3  
AE013599-3822|AAF47169.1|  797|Drosophila melanogaster CG4057-PA...    30   3.3  
AE014134-1363|AAF52578.3|  346|Drosophila melanogaster CG33121-P...    29   4.4  

>BT001486-1|AAN71241.1|  797|Drosophila melanogaster LD23345p
           protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 303 CAFCKLFNMPDTHRTCEVC 359
           C+FC   N PDT R CE+C
Sbjct: 744 CSFCTFLN-PDTKRICEMC 761


>AY070545-1|AAL48016.1|  666|Drosophila melanogaster LD26757p
           protein.
          Length = 666

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 303 CAFCKLFNMPDTHRTCEVC 359
           C+FC   N PDT R CE+C
Sbjct: 613 CSFCTFLN-PDTKRICEMC 630


>AE013599-3823|AAM68306.1|  797|Drosophila melanogaster CG4057-PB,
           isoform B protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 303 CAFCKLFNMPDTHRTCEVC 359
           C+FC   N PDT R CE+C
Sbjct: 744 CSFCTFLN-PDTKRICEMC 761


>AE013599-3822|AAF47169.1|  797|Drosophila melanogaster CG4057-PA,
           isoform A protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 303 CAFCKLFNMPDTHRTCEVC 359
           C+FC   N PDT R CE+C
Sbjct: 744 CSFCTFLN-PDTKRICEMC 761


>AE014134-1363|AAF52578.3|  346|Drosophila melanogaster CG33121-PA
           protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 142 FLEKYQRELISDIKKLKCHLVF 77
           F  KYQ EL+  +KKL  HL+F
Sbjct: 238 FKIKYQTELVESLKKLGIHLIF 259


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,374,281
Number of Sequences: 53049
Number of extensions: 506712
Number of successful extensions: 1425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)