Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060172.seq
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 552 RAPWRGHPVHHPNIWAXXFSTTRRANLMT 638
           R  W G   HH  ++     TT    L+T
Sbjct: 210 RGSWDGVTGHHSGLYPSAVDTTTNQKLLT 238


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -3

Query: 541 SFPPNRSQARFDYGRQDRTGGQTPTHNRQTLPRQLNQTSGCWQ 413
           S P NR   R    R+  T   T +HN +  PR    +S C Q
Sbjct: 263 SSPSNRF-TRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQ 304


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 451 LPRQLNQTSGCWQ*DCAR*YCQ 386
           L + ++  +G W+ +C   YCQ
Sbjct: 14  LLKNISALNGAWRWECKSNYCQ 35


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 367 EMFKDQFDNINVRNLIANNQ 426
           E +  ++DNINV  ++A+ +
Sbjct: 17  EQYTTKYDNINVDEILASER 36


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 556 ALPCQSFPPNRSQARFDYGRQDRTGGQT 473
           ALP   +P  RSQ     GRQ  T  QT
Sbjct: 227 ALPSPLYPWMRSQFERKRGRQTYTRYQT 254


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  QQRIVIFCFNPNNL 7
           Q+ I+ FC +PNN+
Sbjct: 173 QENIIHFCGDPNNV 186


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  QQRIVIFCFNPNNL 7
           Q+ I+ FC +PNN+
Sbjct: 173 QENIIHFCGDPNNV 186


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 556 ALPCQSFPPNRSQARFDYGRQDRTGGQT 473
           ALP   +P  RSQ     GRQ  T  QT
Sbjct: 229 ALPSPLYPWMRSQFERKRGRQTYTRYQT 256


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  QQRIVIFCFNPNNL 7
           Q+ ++ FC +PNN+
Sbjct: 173 QENVIHFCGDPNNV 186


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  QQRIVIFCFNPNNL 7
           Q+ ++ FC +PNN+
Sbjct: 173 QENVIHFCGDPNNV 186


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  QQRIVIFCFNPNNL 7
           Q+ ++ FC +PNN+
Sbjct: 172 QENVIHFCGDPNNV 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,060
Number of Sequences: 336
Number of extensions: 3754
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)