Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060171.seq
(724 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 69 1e-13
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 61 4e-11
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 60 5e-11
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 60 7e-11
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 60 9e-11
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 59 1e-10
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 58 2e-10
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 58 2e-10
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 56 8e-10
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 55 3e-09
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 54 4e-09
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 54 4e-09
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 54 6e-09
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 53 8e-09
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 51 4e-08
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 50 7e-08
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 31 0.048
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 27 0.78
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 9.6
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 9.6
AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical prote... 23 9.6
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 68.9 bits (161), Expect = 1e-13
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ AWK Q ++ + K K P SSYRPI L S LGKI E +++ RL ++E+ + D
Sbjct: 465 FPDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDP 524
Query: 334 QYGFRRGRSCADSFISLISD 275
QYGFR+GRS D+ ++++
Sbjct: 525 QYGFRKGRSTVDAITRVMNN 544
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 60.9 bits (141), Expect = 4e-11
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = -1
Query: 502 WKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDVQYGF 323
WK Q ++ + KP K P+ AS+ RP++L KI E ++ RL Y E H + D Q+GF
Sbjct: 449 WKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQFGF 508
Query: 322 RRGRSCADSFISLI 281
R+GRS ++ +++
Sbjct: 509 RKGRSTGEAIAAVL 522
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 60.5 bits (140), Expect = 5e-11
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = -1
Query: 502 WKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHI--IPDVQY 329
WK Q ++ + KP K P +SSYRP+ + LGK+ E ++ RL+ ++E + D QY
Sbjct: 544 WKRQRLVLLPKPGKPPGESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQY 603
Query: 328 GFRRGRS 308
GFRRGRS
Sbjct: 604 GFRRGRS 610
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 60.1 bits (139), Expect = 7e-11
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ Q WK Q ++ + KP KAP +SSYRP+ + LGK+ E ++ L+ ++E + +
Sbjct: 487 FPQQWKRQRLVLLPKPGKAPGESSSYRPLCMLDALGKVLERLI---LNRHLEDPDSPQLS 543
Query: 340 DVQYGFRRGRSCADSFISLI 281
D QYGFRRGRS + SL+
Sbjct: 544 DAQYGFRRGRSTISAIQSLV 563
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 59.7 bits (138), Expect = 9e-11
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = -1
Query: 532 TLA*QLYSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEAN 353
TL + WK Q ++ I KP K P S++RP+ L L K+ E ++ RL Y E
Sbjct: 500 TLTTGQFPSMWKIQKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTEGP 559
Query: 352 HIIPDVQYGFRRGRSCADSFISLI 281
H + D Q+GFR+ RS D+ ++++
Sbjct: 560 HGLSDRQFGFRKKRSTVDAILAVL 583
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 59.3 bits (137), Expect = 1e-10
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Frame = -1
Query: 502 WKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYV---EANHIIPDVQ 332
WK Q ++ + KP K P +SS+RP+ + + LGK+ E ++ RL+ ++ E +H+ P+ Q
Sbjct: 489 WKIQRLVLLQKPGKPPGESSSFRPLGMLNGLGKVLERLILNRLNEFLENGETSHLSPN-Q 547
Query: 331 YGFRRGRSCADSFISLI 281
YGFRRG+S + ++
Sbjct: 548 YGFRRGKSTVQGILRVV 564
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 58.4 bits (135), Expect = 2e-10
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ WK Q ++ + K K P +SSYRP+S+ LGK+ E ++ RL+ ++E + +
Sbjct: 479 FPSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLS 538
Query: 340 DVQYGFRRGRS 308
D QYGFRRGRS
Sbjct: 539 DAQYGFRRGRS 549
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 58.4 bits (135), Expect = 2e-10
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ WK Q + I KP K P LASS+RPI L + GK++E +L R++ +E + +
Sbjct: 471 FPDEWKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLA 530
Query: 340 DVQYGFRRGRSCADSFISLISD 275
+ QYGFRRGRS + I L+ D
Sbjct: 531 ENQYGFRRGRSTVQA-IQLVVD 551
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 56.4 bits (130), Expect = 8e-10
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ Q WK Q ++ + KP K+P SS+RPI L GK E +L RL+ Y+E + +
Sbjct: 474 FPQPWKKQRLVLLPKPGKSPGEPSSFRPICLLDNTGKALERLLLNRLNEYIEDPESPQLS 533
Query: 340 DVQYGFRRGRS 308
+ Q+GFRRGRS
Sbjct: 534 EQQFGFRRGRS 544
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 54.8 bits (126), Expect = 3e-09
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ + WK Q ++ + KP K P SS+RPI L + GK FE +L RL+ ++E N +
Sbjct: 469 FPEQWKKQRLVLLPKPGKPPGDPSSFRPICLLNNAGKTFERLLLDRLNEHLEDSDNPQLS 528
Query: 340 DVQYGFRRGRS 308
+ QYGFR GRS
Sbjct: 529 EYQYGFRLGRS 539
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 54.0 bits (124), Expect = 4e-09
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = -1
Query: 502 WKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIPDVQY 329
WK Q ++ + K K P +SSYRP+ + LGK+ E ++ RL+ ++E ++ + D Q+
Sbjct: 529 WKRQRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQF 588
Query: 328 GFRRGRS 308
GFRRGRS
Sbjct: 589 GFRRGRS 595
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 54.0 bits (124), Expect = 4e-09
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -1
Query: 442 SYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDVQYGFR 320
SYRPISL SCLGKIFE +L+ R+ + N+IIP Q+GFR
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFR 41
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 53.6 bits (123), Expect = 6e-09
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIP 341
+ AWK Q ++ I KP K ++ SYRP+ + LGK+ E ++ RL ++E + +
Sbjct: 465 FPAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLS 524
Query: 340 DVQYGFRRGRS 308
D QYGFRRG S
Sbjct: 525 DRQYGFRRGCS 535
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 53.2 bits (122), Expect = 8e-09
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -1
Query: 502 WKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVE--ANHIIPDVQY 329
WK Q ++ + KP K P SYRP+ + LGK+ E ++ RL ++E A + D Q+
Sbjct: 536 WKRQRLVLLPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQH 595
Query: 328 GFRRGRSCADSFISLI 281
GFRRGRS + ++I
Sbjct: 596 GFRRGRSTIGAIRTVI 611
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 50.8 bits (116), Expect = 4e-08
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ WK Q ++ I KP+K P S RPI L GK E ++ RL+ ++E + + D
Sbjct: 449 FPDEWKRQRLVLIPKPNKPPGEPGSVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDD 508
Query: 334 QYGFRRGRSCADSFISLISDLDI 266
Q+GFR RS D+ ++ + +
Sbjct: 509 QFGFRSRRSTVDAIQRVVDIVSV 531
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 50.0 bits (114), Expect = 7e-08
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -1
Query: 517 LYSQAWKTQ-CVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIP 341
++ WK Q V+ I KP K P + S RPI L + K E ++ RL+ ++E +
Sbjct: 452 VFPDNWKKQRLVLSIPKPGKRPGESGSSRPICLIDGVAKGLERVILHRLNNHIERVQGLS 511
Query: 340 DVQYGFRRGRSCADSFISLIS 278
+ QYGFR+GR+ D+ ++S
Sbjct: 512 ENQYGFRKGRATTDAIEKVLS 532
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 30.7 bits (66), Expect = 0.048
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = -1
Query: 517 LYSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPD 338
++ WK+ + P+ K + S+YR I+ + K FE + + + I
Sbjct: 521 VFPALWKSCWLFPVHKKG-CRSIVSNYRGITQTCATAKTFELCIFPTI--LHSCSSAISP 577
Query: 337 VQYGFRRGRSCADSFISLISDL 272
Q+GF GRS + + +S ++++
Sbjct: 578 KQHGFMPGRSTSTNLMSFVTNI 599
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 26.6 bits (56), Expect = 0.78
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 487 VIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDVQ 332
VI +++ + SS RPISL + K+ ++K RLD + II Q
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKLLSKVIKPRLDCIIGKWGIISTAQ 554
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 183 LNIKENIYTLWRELWKKDQE 124
+N+ +NI+ + R+ W KD E
Sbjct: 64 MNLMKNIHKVQRDKWGKDIE 83
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 183 LNIKENIYTLWRELWKKDQE 124
+N+ +NI+ + R+ W KD E
Sbjct: 64 MNLMKNIHKVQRDKWGKDIE 83
>AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical protein
protein.
Length = 195
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 657 SEFPISLQSRRNTTPGMDDY 598
S +++ +R NT+ G+DDY
Sbjct: 60 SNVSVAIGNRVNTSTGLDDY 79
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,439
Number of Sequences: 2352
Number of extensions: 15925
Number of successful extensions: 58
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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